JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:40 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3h7ia2.name2015-04-17 17:03 0 Job name flag file
[ ]jp_YwRu_LB.align2015-04-17 18:40 4.6KPSIBLAST alignment in FASTA format
[TXT]jp_YwRu_LB.als2015-04-17 18:40 2.3KAlscript command file for PS/PDF output
[ ]jp_YwRu_LB.blast.gz2015-04-17 18:40 13KCompressed PSIBLAST output file
[TXT]jp_YwRu_LB.coils.csv2015-04-17 18:40 780 COILS output in CSV format
[ ]jp_YwRu_LB.coilseq.lupas_142015-04-17 18:40 5.2KCOILS output, window length 14
[ ]jp_YwRu_LB.coilseq.lupas_212015-04-17 18:40 5.2KCOILS output, window length 21
[ ]jp_YwRu_LB.coilseq.lupas_282015-04-17 18:40 5.2KCOILS output, window length 28
[ ]jp_YwRu_LB.concise2015-04-17 18:40 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_YwRu_LB.concise.blc2015-04-17 18:40 6.5KBLC format prediction and alignment data
[ ]jp_YwRu_LB.concise.fasta2015-04-17 18:40 6.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_YwRu_LB.concise.pdf2015-04-17 18:40 45KPDF prediction and alignment data
[ ]jp_YwRu_LB.concise.ps2015-04-17 18:40 764KPrediction: coiled-coil, solvent, alignment
[ ]jp_YwRu_LB.fasta2015-04-17 18:04 139 Input query sequence in FASTA format
[ ]jp_YwRu_LB.full_MSA.fasta2015-04-17 18:40 13KFull MSA before JPred filters in FASTA
[TXT]jp_YwRu_LB.full_MSA.fasta.noGaps.html2015-04-17 18:40 9.9KFull MSA before JPred filters in FASTA
[TXT]jp_YwRu_LB.full_MSA.fasta.withGaps.html2015-04-17 18:40 37KFull MSA before JPred filters in FASTA
[ ]jp_YwRu_LB.hmm2015-04-17 18:40 23KHHMer2 profile of the alignment
[TXT]jp_YwRu_LB.html2015-04-17 18:40 23KHTML prediction and alignment data
[ ]jp_YwRu_LB.input2015-04-17 17:03 132 Raw input data for analysis
[ ]jp_YwRu_LB.jalview2015-04-17 18:40 3.3KJalview annotation file for alignment
[ ]jp_YwRu_LB.jnet2015-04-17 18:40 4.6KJnet secondary structure output
[TXT]jp_YwRu_LB.profile2015-04-17 18:27 20KPSIBLAST profile from alignment
[ ]jp_YwRu_LB.pssm2015-04-17 18:40 27KPSIBLAST PSSM for Jnet
[TXT]jp_YwRu_LB.results.html2016-02-15 12:21 60KJPred results page
[TXT]jp_YwRu_LB.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_YwRu_LB.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_YwRu_LB.seq2015-04-17 17:03 139 Sequence data file
[TXT]jp_YwRu_LB.simple.html2015-04-17 18:40 1.3KBrief HTML: sequence and prediction only
[TXT]jp_YwRu_LB.svg.html2015-04-17 18:40 52KJalview SVG summary of results
[ ]jp_YwRu_LB.tar.gz2015-04-17 18:40 107KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.