JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3l00a2.name2015-04-17 18:53 0 Job name flag file
[ ]jp_6K8YOND.align2015-04-17 21:07 91KPSIBLAST alignment in FASTA format
[TXT]jp_6K8YOND.als2015-04-17 21:07 2.1KAlscript command file for PS/PDF output
[ ]jp_6K8YOND.blast.gz2015-04-17 21:06 3.4MCompressed PSIBLAST output file
[TXT]jp_6K8YOND.coils.csv2015-04-17 21:07 558 COILS output in CSV format
[ ]jp_6K8YOND.coilseq.lupas_142015-04-17 21:07 3.7KCOILS output, window length 14
[ ]jp_6K8YOND.coilseq.lupas_212015-04-17 21:07 3.7KCOILS output, window length 21
[ ]jp_6K8YOND.coilseq.lupas_282015-04-17 21:07 3.7KCOILS output, window length 28
[ ]jp_6K8YOND.concise2015-04-17 21:07 175KPrediction: coiled-coil, solvent, alignment
[ ]jp_6K8YOND.concise.blc2015-04-17 21:07 91KBLC format prediction and alignment data
[ ]jp_6K8YOND.concise.fasta2015-04-17 21:07 92KPrediction: coiled-coil, solvent, alignment
[ ]jp_6K8YOND.concise.pdf2015-04-17 21:07 561KPDF prediction and alignment data
[ ]jp_6K8YOND.concise.ps2015-04-17 21:07 9.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_6K8YOND.fasta2015-04-17 20:59 102 Input query sequence in FASTA format
[ ]jp_6K8YOND.full_MSA.fasta2015-04-17 21:06 6.5MFull MSA before JPred filters in FASTA
[TXT]jp_6K8YOND.full_MSA.fasta.noGaps.html2015-04-17 21:07 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_6K8YOND.full_MSA.fasta.withGaps.html2015-04-17 21:07 20MFull MSA before JPred filters in FASTA
[ ]jp_6K8YOND.hmm2015-04-17 21:07 17KHHMer2 profile of the alignment
[TXT]jp_6K8YOND.html2015-04-17 21:07 266KHTML prediction and alignment data
[ ]jp_6K8YOND.input2015-04-17 18:53 95 Raw input data for analysis
[ ]jp_6K8YOND.jalview2015-04-17 21:07 2.6KJalview annotation file for alignment
[ ]jp_6K8YOND.jnet2015-04-17 21:07 3.3KJnet secondary structure output
[TXT]jp_6K8YOND.profile2015-04-17 21:04 14KPSIBLAST profile from alignment
[ ]jp_6K8YOND.pssm2015-04-17 21:07 19KPSIBLAST PSSM for Jnet
[TXT]jp_6K8YOND.results.html2016-02-15 12:21 46KJPred results page
[TXT]jp_6K8YOND.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6K8YOND.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6K8YOND.seq2015-04-17 18:53 102 Sequence data file
[TXT]jp_6K8YOND.simple.html2015-04-17 21:07 1.2KBrief HTML: sequence and prediction only
[TXT]jp_6K8YOND.svg.html2015-04-17 21:07 38KJalview SVG summary of results
[ ]jp_6K8YOND.tar.gz2015-04-17 21:07 5.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.