JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3lvjc_.name2015-04-17 19:30 0 Job name flag file
[ ]jp_MYujjxI.align2015-04-17 22:12 93KPSIBLAST alignment in FASTA format
[TXT]jp_MYujjxI.als2015-04-17 22:12 2.1KAlscript command file for PS/PDF output
[ ]jp_MYujjxI.blast.gz2015-04-17 22:12 874KCompressed PSIBLAST output file
[TXT]jp_MYujjxI.coils.csv2015-04-17 22:12 492 COILS output in CSV format
[ ]jp_MYujjxI.coilseq.lupas_142015-04-17 22:12 3.2KCOILS output, window length 14
[ ]jp_MYujjxI.coilseq.lupas_212015-04-17 22:12 3.2KCOILS output, window length 21
[ ]jp_MYujjxI.coilseq.lupas_282015-04-17 22:12 3.2KCOILS output, window length 28
[ ]jp_MYujjxI.concise2015-04-17 22:12 176KPrediction: coiled-coil, solvent, alignment
[ ]jp_MYujjxI.concise.blc2015-04-17 22:12 92KBLC format prediction and alignment data
[ ]jp_MYujjxI.concise.fasta2015-04-17 22:12 94KPrediction: coiled-coil, solvent, alignment
[ ]jp_MYujjxI.concise.pdf2015-04-17 22:12 581KPDF prediction and alignment data
[ ]jp_MYujjxI.concise.ps2015-04-17 22:12 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_MYujjxI.fasta2015-04-17 22:06 91 Input query sequence in FASTA format
[ ]jp_MYujjxI.full_MSA.fasta2015-04-17 22:12 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_MYujjxI.full_MSA.fasta.noGaps.html2015-04-17 22:12 775KFull MSA before JPred filters in FASTA
[TXT]jp_MYujjxI.full_MSA.fasta.withGaps.html2015-04-17 22:12 6.4MFull MSA before JPred filters in FASTA
[ ]jp_MYujjxI.hmm2015-04-17 22:12 14KHHMer2 profile of the alignment
[TXT]jp_MYujjxI.html2015-04-17 22:12 289KHTML prediction and alignment data
[ ]jp_MYujjxI.input2015-04-17 19:30 84 Raw input data for analysis
[ ]jp_MYujjxI.jalview2015-04-17 22:12 2.4KJalview annotation file for alignment
[ ]jp_MYujjxI.jnet2015-04-17 22:12 2.9KJnet secondary structure output
[TXT]jp_MYujjxI.profile2015-04-17 22:10 13KPSIBLAST profile from alignment
[ ]jp_MYujjxI.pssm2015-04-17 22:12 17KPSIBLAST PSSM for Jnet
[TXT]jp_MYujjxI.results.html2016-02-15 12:21 42KJPred results page
[TXT]jp_MYujjxI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_MYujjxI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_MYujjxI.seq2015-04-17 19:30 91 Sequence data file
[TXT]jp_MYujjxI.simple.html2015-04-17 22:12 1.2KBrief HTML: sequence and prediction only
[TXT]jp_MYujjxI.svg.html2015-04-17 22:13 33KJalview SVG summary of results
[ ]jp_MYujjxI.tar.gz2015-04-17 22:13 2.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.