JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3n08a_.name2015-04-17 19:30 0 Job name flag file
[ ]jp_mtRTSXe.align2015-04-17 22:14 169KPSIBLAST alignment in FASTA format
[TXT]jp_mtRTSXe.als2015-04-17 22:14 2.5KAlscript command file for PS/PDF output
[ ]jp_mtRTSXe.blast.gz2015-04-17 22:13 2.2MCompressed PSIBLAST output file
[TXT]jp_mtRTSXe.coils.csv2015-04-17 22:14 936 COILS output in CSV format
[ ]jp_mtRTSXe.coilseq.lupas_142015-04-17 22:14 6.3KCOILS output, window length 14
[ ]jp_mtRTSXe.coilseq.lupas_212015-04-17 22:14 6.3KCOILS output, window length 21
[ ]jp_mtRTSXe.coilseq.lupas_282015-04-17 22:14 6.3KCOILS output, window length 28
[ ]jp_mtRTSXe.concise2015-04-17 22:14 330KPrediction: coiled-coil, solvent, alignment
[ ]jp_mtRTSXe.concise.blc2015-04-17 22:14 169KBLC format prediction and alignment data
[ ]jp_mtRTSXe.concise.fasta2015-04-17 22:14 171KPrediction: coiled-coil, solvent, alignment
[ ]jp_mtRTSXe.concise.pdf2015-04-17 22:14 1.1MPDF prediction and alignment data
[ ]jp_mtRTSXe.concise.ps2015-04-17 22:14 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_mtRTSXe.fasta2015-04-17 22:08 166 Input query sequence in FASTA format
[ ]jp_mtRTSXe.full_MSA.fasta2015-04-17 22:13 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_mtRTSXe.full_MSA.fasta.noGaps.html2015-04-17 22:14 719KFull MSA before JPred filters in FASTA
[TXT]jp_mtRTSXe.full_MSA.fasta.withGaps.html2015-04-17 22:14 12MFull MSA before JPred filters in FASTA
[ ]jp_mtRTSXe.hmm2015-04-17 22:14 28KHHMer2 profile of the alignment
[TXT]jp_mtRTSXe.html2015-04-17 22:14 375KHTML prediction and alignment data
[ ]jp_mtRTSXe.input2015-04-17 19:30 158 Raw input data for analysis
[ ]jp_mtRTSXe.jalview2015-04-17 22:14 3.8KJalview annotation file for alignment
[ ]jp_mtRTSXe.jnet2015-04-17 22:14 5.6KJnet secondary structure output
[TXT]jp_mtRTSXe.profile2015-04-17 22:12 24KPSIBLAST profile from alignment
[ ]jp_mtRTSXe.pssm2015-04-17 22:14 32KPSIBLAST PSSM for Jnet
[TXT]jp_mtRTSXe.results.html2016-02-15 12:21 68KJPred results page
[TXT]jp_mtRTSXe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mtRTSXe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mtRTSXe.seq2015-04-17 19:30 166 Sequence data file
[TXT]jp_mtRTSXe.simple.html2015-04-17 22:14 1.4KBrief HTML: sequence and prediction only
[TXT]jp_mtRTSXe.svg.html2015-04-17 22:14 60KJalview SVG summary of results
[ ]jp_mtRTSXe.tar.gz2015-04-17 22:14 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.