JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3nira_.name2015-04-17 17:41 0 Job name flag file
[ ]jp_ewIsWxz.align2015-04-17 19:09 3.6KPSIBLAST alignment in FASTA format
[TXT]jp_ewIsWxz.als2015-04-17 19:09 1.7KAlscript command file for PS/PDF output
[ ]jp_ewIsWxz.blast.gz2015-04-17 19:09 7.4KCompressed PSIBLAST output file
[TXT]jp_ewIsWxz.coils.csv2015-04-17 19:09 306 COILS output in CSV format
[ ]jp_ewIsWxz.coilseq.lupas_142015-04-17 19:09 1.9KCOILS output, window length 14
[ ]jp_ewIsWxz.coilseq.lupas_212015-04-17 19:09 1.9KCOILS output, window length 21
[ ]jp_ewIsWxz.coilseq.lupas_282015-04-17 19:09 1.9KCOILS output, window length 28
[ ]jp_ewIsWxz.concise2015-04-17 19:09 8.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_ewIsWxz.concise.blc2015-04-17 19:09 4.3KBLC format prediction and alignment data
[ ]jp_ewIsWxz.concise.fasta2015-04-17 19:09 4.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_ewIsWxz.concise.pdf2015-04-17 19:09 23KPDF prediction and alignment data
[ ]jp_ewIsWxz.concise.ps2015-04-17 19:09 418KPrediction: coiled-coil, solvent, alignment
[ ]jp_ewIsWxz.fasta2015-04-17 19:03 59 Input query sequence in FASTA format
[ ]jp_ewIsWxz.full_MSA.fasta2015-04-17 19:09 5.9KFull MSA before JPred filters in FASTA
[TXT]jp_ewIsWxz.full_MSA.fasta.noGaps.html2015-04-17 19:09 16KFull MSA before JPred filters in FASTA
[TXT]jp_ewIsWxz.full_MSA.fasta.withGaps.html2015-04-17 19:09 21KFull MSA before JPred filters in FASTA
[ ]jp_ewIsWxz.hmm2015-04-17 19:09 8.6KHHMer2 profile of the alignment
[TXT]jp_ewIsWxz.html2015-04-17 19:09 19KHTML prediction and alignment data
[ ]jp_ewIsWxz.input2015-04-17 17:41 53 Raw input data for analysis
[ ]jp_ewIsWxz.jalview2015-04-17 19:09 1.7KJalview annotation file for alignment
[ ]jp_ewIsWxz.jnet2015-04-17 19:09 1.8KJnet secondary structure output
[TXT]jp_ewIsWxz.profile2015-04-17 19:07 7.8KPSIBLAST profile from alignment
[ ]jp_ewIsWxz.pssm2015-04-17 19:09 9.9KPSIBLAST PSSM for Jnet
[TXT]jp_ewIsWxz.results.html2016-02-15 12:21 30KJPred results page
[TXT]jp_ewIsWxz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ewIsWxz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ewIsWxz.seq2015-04-17 17:41 59 Sequence data file
[TXT]jp_ewIsWxz.simple.html2015-04-17 19:09 1.0KBrief HTML: sequence and prediction only
[TXT]jp_ewIsWxz.svg.html2015-04-17 19:09 22KJalview SVG summary of results
[ ]jp_ewIsWxz.tar.gz2015-04-17 19:09 56KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.