A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:11 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3piwa_.name | 2015-04-17 17:04 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_QrtjFr1.align | 2015-04-17 18:11 | 81K | PSIBLAST alignment in FASTA format |
| jp_QrtjFr1.als | 2015-04-17 18:11 | 2.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_QrtjFr1.blast.gz | 2015-04-17 18:10 | 351K | Compressed PSIBLAST output file |
| jp_QrtjFr1.coils.csv | 2015-04-17 18:11 | 954 | COILS output in CSV format |
| jp_QrtjFr1.coilseq.lupas_14 | 2015-04-17 18:11 | 6.5K | COILS output, window length 14 |
| jp_QrtjFr1.coilseq.lupas_21 | 2015-04-17 18:11 | 6.5K | COILS output, window length 21 |
| jp_QrtjFr1.coilseq.lupas_28 | 2015-04-17 18:11 | 6.5K | COILS output, window length 28 |
| jp_QrtjFr1.concise | 2015-04-17 18:11 | 161K | Prediction: coiled-coil, solvent, alignment |
| jp_QrtjFr1.concise.blc | 2015-04-17 18:11 | 82K | BLC format prediction and alignment data |
| jp_QrtjFr1.concise.fasta | 2015-04-17 18:11 | 83K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_QrtjFr1.concise.pdf | 2015-04-17 18:11 | 537K | PDF prediction and alignment data |
| jp_QrtjFr1.concise.ps | 2015-04-17 18:11 | 9.6M | Prediction: coiled-coil, solvent, alignment |
| jp_QrtjFr1.fasta | 2015-04-17 18:05 | 169 | Input query sequence in FASTA format |
| jp_QrtjFr1.full_MSA.fasta | 2015-04-17 18:10 | 582K | Full MSA before JPred filters in FASTA |
| jp_QrtjFr1.full_MSA.fasta.noGaps.html | 2015-04-17 18:11 | 230K | Full MSA before JPred filters in FASTA |
| jp_QrtjFr1.full_MSA.fasta.withGaps.html | 2015-04-17 18:11 | 2.5M | Full MSA before JPred filters in FASTA |
| jp_QrtjFr1.hmm | 2015-04-17 18:11 | 29K | HHMer2 profile of the alignment |
| jp_QrtjFr1.html | 2015-04-17 18:11 | 186K | HTML prediction and alignment data |
| jp_QrtjFr1.input | 2015-04-17 17:04 | 161 | Raw input data for analysis |
| jp_QrtjFr1.jalview | 2015-04-17 18:11 | 3.9K | Jalview annotation file for alignment |
| jp_QrtjFr1.jnet | 2015-04-17 18:11 | 5.7K | Jnet secondary structure output |
| jp_QrtjFr1.profile | 2015-04-17 18:09 | 25K | PSIBLAST profile from alignment |
| jp_QrtjFr1.pssm | 2015-04-17 18:11 | 33K | PSIBLAST PSSM for Jnet |
| jp_QrtjFr1.results.html | 2016-02-15 12:21 | 69K | JPred results page |
| jp_QrtjFr1.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_QrtjFr1.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_QrtjFr1.seq | 2015-04-17 17:04 | 169 | Sequence data file |
| jp_QrtjFr1.simple.html | 2015-04-17 18:11 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_QrtjFr1.svg.html) | jp_QrtjFr1.svg.html | 2015-04-17 18:11 | 61K | Jalview SVG summary of results |
| jp_QrtjFr1.tar.gz | 2015-04-17 18:11 | 1.2M | Archive containing complete results |
