JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rloa1.name2015-04-17 17:05 0 Job name flag file
[ ]jp_U_WcZZZ.align2015-04-17 18:07 13KPSIBLAST alignment in FASTA format
[TXT]jp_U_WcZZZ.als2015-04-17 18:07 2.6KAlscript command file for PS/PDF output
[ ]jp_U_WcZZZ.blast.gz2015-04-17 18:07 42KCompressed PSIBLAST output file
[TXT]jp_U_WcZZZ.coils.csv2015-04-17 18:07 618 COILS output in CSV format
[ ]jp_U_WcZZZ.coilseq.lupas_142015-04-17 18:07 4.1KCOILS output, window length 14
[ ]jp_U_WcZZZ.coilseq.lupas_212015-04-17 18:07 4.1KCOILS output, window length 21
[ ]jp_U_WcZZZ.coilseq.lupas_282015-04-17 18:07 4.1KCOILS output, window length 28
[ ]jp_U_WcZZZ.concise2015-04-17 18:07 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_U_WcZZZ.concise.blc2015-04-17 18:07 14KBLC format prediction and alignment data
[ ]jp_U_WcZZZ.concise.fasta2015-04-17 18:07 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_U_WcZZZ.concise.pdf2015-04-17 18:07 84KPDF prediction and alignment data
[ ]jp_U_WcZZZ.concise.ps2015-04-17 18:07 1.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_U_WcZZZ.fasta2015-04-17 18:05 112 Input query sequence in FASTA format
[ ]jp_U_WcZZZ.full_MSA.fasta2015-04-17 18:07 35KFull MSA before JPred filters in FASTA
[TXT]jp_U_WcZZZ.full_MSA.fasta.noGaps.html2015-04-17 18:07 58KFull MSA before JPred filters in FASTA
[TXT]jp_U_WcZZZ.full_MSA.fasta.withGaps.html2015-04-17 18:07 143KFull MSA before JPred filters in FASTA
[ ]jp_U_WcZZZ.hmm2015-04-17 18:07 18KHHMer2 profile of the alignment
[TXT]jp_U_WcZZZ.html2015-04-17 18:07 44KHTML prediction and alignment data
[ ]jp_U_WcZZZ.input2015-04-17 17:05 105 Raw input data for analysis
[ ]jp_U_WcZZZ.jalview2015-04-17 18:07 2.8KJalview annotation file for alignment
[ ]jp_U_WcZZZ.jnet2015-04-17 18:07 3.7KJnet secondary structure output
[TXT]jp_U_WcZZZ.profile2015-04-17 18:06 16KPSIBLAST profile from alignment
[ ]jp_U_WcZZZ.pssm2015-04-17 18:07 21KPSIBLAST PSSM for Jnet
[TXT]jp_U_WcZZZ.results.html2016-02-15 12:21 50KJPred results page
[TXT]jp_U_WcZZZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_U_WcZZZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_U_WcZZZ.seq2015-04-17 17:05 112 Sequence data file
[TXT]jp_U_WcZZZ.simple.html2015-04-17 18:07 1.3KBrief HTML: sequence and prediction only
[TXT]jp_U_WcZZZ.svg.html2015-04-17 18:07 42KJalview SVG summary of results
[ ]jp_U_WcZZZ.tar.gz2015-04-17 18:07 190KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.