JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:20 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rofa_.name2015-04-17 19:31 0 Job name flag file
[ ]jp_TJqga6B.align2015-04-17 22:19 162KPSIBLAST alignment in FASTA format
[TXT]jp_TJqga6B.als2015-04-17 22:19 2.5KAlscript command file for PS/PDF output
[ ]jp_TJqga6B.blast.gz2015-04-17 22:18 6.3MCompressed PSIBLAST output file
[TXT]jp_TJqga6B.coils.csv2015-04-17 22:19 1.0KCOILS output in CSV format
[ ]jp_TJqga6B.coilseq.lupas_142015-04-17 22:19 6.6KCOILS output, window length 14
[ ]jp_TJqga6B.coilseq.lupas_212015-04-17 22:19 6.6KCOILS output, window length 21
[ ]jp_TJqga6B.coilseq.lupas_282015-04-17 22:19 6.6KCOILS output, window length 28
[ ]jp_TJqga6B.concise2015-04-17 22:19 316KPrediction: coiled-coil, solvent, alignment
[ ]jp_TJqga6B.concise.blc2015-04-17 22:19 162KBLC format prediction and alignment data
[ ]jp_TJqga6B.concise.fasta2015-04-17 22:19 164KPrediction: coiled-coil, solvent, alignment
[ ]jp_TJqga6B.concise.pdf2015-04-17 22:19 1.1MPDF prediction and alignment data
[ ]jp_TJqga6B.concise.ps2015-04-17 22:19 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_TJqga6B.fasta2015-04-17 22:13 173 Input query sequence in FASTA format
[ ]jp_TJqga6B.full_MSA.fasta2015-04-17 22:18 15MFull MSA before JPred filters in FASTA
[TXT]jp_TJqga6B.full_MSA.fasta.noGaps.html2015-04-17 22:20 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_TJqga6B.full_MSA.fasta.withGaps.html2015-04-17 22:20 40MFull MSA before JPred filters in FASTA
[ ]jp_TJqga6B.hmm2015-04-17 22:19 30KHHMer2 profile of the alignment
[TXT]jp_TJqga6B.html2015-04-17 22:19 354KHTML prediction and alignment data
[ ]jp_TJqga6B.input2015-04-17 19:31 165 Raw input data for analysis
[ ]jp_TJqga6B.jalview2015-04-17 22:19 4.0KJalview annotation file for alignment
[ ]jp_TJqga6B.jnet2015-04-17 22:19 5.8KJnet secondary structure output
[TXT]jp_TJqga6B.profile2015-04-17 22:16 26KPSIBLAST profile from alignment
[ ]jp_TJqga6B.pssm2015-04-17 22:19 34KPSIBLAST PSSM for Jnet
[TXT]jp_TJqga6B.results.html2016-02-15 12:21 72KJPred results page
[TXT]jp_TJqga6B.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_TJqga6B.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_TJqga6B.seq2015-04-17 19:31 173 Sequence data file
[TXT]jp_TJqga6B.simple.html2015-04-17 22:19 1.4KBrief HTML: sequence and prediction only
[TXT]jp_TJqga6B.svg.html2015-04-17 22:20 64KJalview SVG summary of results
[ ]jp_TJqga6B.tar.gz2015-04-17 22:20 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.