JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rvca_.name2015-04-17 18:18 0 Job name flag file
[ ]jp_9PD_tbr.align2015-04-17 20:11 2.0KPSIBLAST alignment in FASTA format
[TXT]jp_9PD_tbr.als2015-04-17 20:11 2.4KAlscript command file for PS/PDF output
[ ]jp_9PD_tbr.blast.gz2015-04-17 20:11 9.0KCompressed PSIBLAST output file
[TXT]jp_9PD_tbr.coils.csv2015-04-17 20:11 738 COILS output in CSV format
[ ]jp_9PD_tbr.coilseq.lupas_142015-04-17 20:11 5.0KCOILS output, window length 14
[ ]jp_9PD_tbr.coilseq.lupas_212015-04-17 20:11 5.0KCOILS output, window length 21
[ ]jp_9PD_tbr.coilseq.lupas_282015-04-17 20:11 5.0KCOILS output, window length 28
[ ]jp_9PD_tbr.concise2015-04-17 20:11 8.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_9PD_tbr.concise.blc2015-04-17 20:11 3.8KBLC format prediction and alignment data
[ ]jp_9PD_tbr.concise.fasta2015-04-17 20:11 3.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_9PD_tbr.concise.pdf2015-04-17 20:11 25KPDF prediction and alignment data
[ ]jp_9PD_tbr.concise.ps2015-04-17 20:11 445KPrediction: coiled-coil, solvent, alignment
[ ]jp_9PD_tbr.fasta2015-04-17 20:08 132 Input query sequence in FASTA format
[ ]jp_9PD_tbr.full_MSA.fasta2015-04-17 20:11 13KFull MSA before JPred filters in FASTA
[TXT]jp_9PD_tbr.full_MSA.fasta.noGaps.html2015-04-17 20:11 24KFull MSA before JPred filters in FASTA
[TXT]jp_9PD_tbr.full_MSA.fasta.withGaps.html2015-04-17 20:11 28KFull MSA before JPred filters in FASTA
[ ]jp_9PD_tbr.hmm2015-04-17 20:11 22KHHMer2 profile of the alignment
[TXT]jp_9PD_tbr.html2015-04-17 20:11 17KHTML prediction and alignment data
[ ]jp_9PD_tbr.input2015-04-17 18:18 125 Raw input data for analysis
[ ]jp_9PD_tbr.jalview2015-04-17 20:11 3.2KJalview annotation file for alignment
[ ]jp_9PD_tbr.jnet2015-04-17 20:11 4.4KJnet secondary structure output
[TXT]jp_9PD_tbr.profile2015-04-17 20:11 19KPSIBLAST profile from alignment
[ ]jp_9PD_tbr.pssm2015-04-17 20:11 25KPSIBLAST PSSM for Jnet
[TXT]jp_9PD_tbr.results.html2016-02-15 12:21 59KJPred results page
[TXT]jp_9PD_tbr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9PD_tbr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_9PD_tbr.seq2015-04-17 18:18 132 Sequence data file
[TXT]jp_9PD_tbr.simple.html2015-04-17 20:11 1.3KBrief HTML: sequence and prediction only
[TXT]jp_9PD_tbr.svg.html2015-04-17 20:11 51KJalview SVG summary of results
[ ]jp_9PD_tbr.tar.gz2015-04-17 20:12 69KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.