JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3s4ya2.name2015-04-17 19:29 0 Job name flag file
[ ]jp_Oe7_Eod.align2015-04-17 22:11 34KPSIBLAST alignment in FASTA format
[TXT]jp_Oe7_Eod.als2015-04-17 22:11 2.4KAlscript command file for PS/PDF output
[ ]jp_Oe7_Eod.blast.gz2015-04-17 22:11 203KCompressed PSIBLAST output file
[TXT]jp_Oe7_Eod.coils.csv2015-04-17 22:11 516 COILS output in CSV format
[ ]jp_Oe7_Eod.coilseq.lupas_142015-04-17 22:11 3.4KCOILS output, window length 14
[ ]jp_Oe7_Eod.coilseq.lupas_212015-04-17 22:11 3.4KCOILS output, window length 21
[ ]jp_Oe7_Eod.coilseq.lupas_282015-04-17 22:11 3.4KCOILS output, window length 28
[ ]jp_Oe7_Eod.concise2015-04-17 22:11 68KPrediction: coiled-coil, solvent, alignment
[ ]jp_Oe7_Eod.concise.blc2015-04-17 22:11 35KBLC format prediction and alignment data
[ ]jp_Oe7_Eod.concise.fasta2015-04-17 22:11 35KPrediction: coiled-coil, solvent, alignment
[ ]jp_Oe7_Eod.concise.pdf2015-04-17 22:11 227KPDF prediction and alignment data
[ ]jp_Oe7_Eod.concise.ps2015-04-17 22:11 3.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_Oe7_Eod.fasta2015-04-17 22:05 95 Input query sequence in FASTA format
[ ]jp_Oe7_Eod.full_MSA.fasta2015-04-17 22:11 283KFull MSA before JPred filters in FASTA
[TXT]jp_Oe7_Eod.full_MSA.fasta.noGaps.html2015-04-17 22:11 117KFull MSA before JPred filters in FASTA
[TXT]jp_Oe7_Eod.full_MSA.fasta.withGaps.html2015-04-17 22:11 950KFull MSA before JPred filters in FASTA
[ ]jp_Oe7_Eod.hmm2015-04-17 22:11 15KHHMer2 profile of the alignment
[TXT]jp_Oe7_Eod.html2015-04-17 22:11 111KHTML prediction and alignment data
[ ]jp_Oe7_Eod.input2015-04-17 19:29 88 Raw input data for analysis
[ ]jp_Oe7_Eod.jalview2015-04-17 22:11 2.4KJalview annotation file for alignment
[ ]jp_Oe7_Eod.jnet2015-04-17 22:11 3.0KJnet secondary structure output
[TXT]jp_Oe7_Eod.profile2015-04-17 22:09 13KPSIBLAST profile from alignment
[ ]jp_Oe7_Eod.pssm2015-04-17 22:11 17KPSIBLAST PSSM for Jnet
[TXT]jp_Oe7_Eod.results.html2016-02-15 12:21 43KJPred results page
[TXT]jp_Oe7_Eod.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Oe7_Eod.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Oe7_Eod.seq2015-04-17 19:29 95 Sequence data file
[TXT]jp_Oe7_Eod.simple.html2015-04-17 22:11 1.2KBrief HTML: sequence and prediction only
[TXT]jp_Oe7_Eod.svg.html2015-04-17 22:11 35KJalview SVG summary of results
[ ]jp_Oe7_Eod.tar.gz2015-04-17 22:11 603KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.