JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:55 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3sk7a_.name2015-04-17 18:55 0 Job name flag file
[ ]jp_157yk6n.align2015-04-17 21:55 12KPSIBLAST alignment in FASTA format
[TXT]jp_157yk6n.als2015-04-17 21:55 2.2KAlscript command file for PS/PDF output
[ ]jp_157yk6n.blast.gz2015-04-17 21:55 48KCompressed PSIBLAST output file
[TXT]jp_157yk6n.coils.csv2015-04-17 21:55 702 COILS output in CSV format
[ ]jp_157yk6n.coilseq.lupas_142015-04-17 21:55 4.7KCOILS output, window length 14
[ ]jp_157yk6n.coilseq.lupas_212015-04-17 21:55 4.7KCOILS output, window length 21
[ ]jp_157yk6n.coilseq.lupas_282015-04-17 21:55 4.7KCOILS output, window length 28
[ ]jp_157yk6n.concise2015-04-17 21:55 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_157yk6n.concise.blc2015-04-17 21:55 14KBLC format prediction and alignment data
[ ]jp_157yk6n.concise.fasta2015-04-17 21:55 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_157yk6n.concise.pdf2015-04-17 21:55 85KPDF prediction and alignment data
[ ]jp_157yk6n.concise.ps2015-04-17 21:55 1.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_157yk6n.fasta2015-04-17 21:01 126 Input query sequence in FASTA format
[ ]jp_157yk6n.full_MSA.fasta2015-04-17 21:55 46KFull MSA before JPred filters in FASTA
[TXT]jp_157yk6n.full_MSA.fasta.noGaps.html2015-04-17 21:55 56KFull MSA before JPred filters in FASTA
[TXT]jp_157yk6n.full_MSA.fasta.withGaps.html2015-04-17 21:55 174KFull MSA before JPred filters in FASTA
[ ]jp_157yk6n.hmm2015-04-17 21:55 21KHHMer2 profile of the alignment
[TXT]jp_157yk6n.html2015-04-17 21:55 43KHTML prediction and alignment data
[ ]jp_157yk6n.input2015-04-17 18:55 119 Raw input data for analysis
[ ]jp_157yk6n.jalview2015-04-17 21:55 3.1KJalview annotation file for alignment
[ ]jp_157yk6n.jnet2015-04-17 21:55 4.2KJnet secondary structure output
[TXT]jp_157yk6n.profile2015-04-17 21:44 18KPSIBLAST profile from alignment
[ ]jp_157yk6n.pssm2015-04-17 21:55 24KPSIBLAST PSSM for Jnet
[TXT]jp_157yk6n.results.html2016-02-15 12:21 55KJPred results page
[TXT]jp_157yk6n.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_157yk6n.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_157yk6n.seq2015-04-17 18:55 126 Sequence data file
[TXT]jp_157yk6n.simple.html2015-04-17 21:55 1.2KBrief HTML: sequence and prediction only
[TXT]jp_157yk6n.svg.html2015-04-17 21:55 47KJalview SVG summary of results
[ ]jp_157yk6n.tar.gz2015-04-17 21:55 208KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.