JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[ ]jp_z0_25Ya.input2015-04-17 18:19 242 Raw input data for analysis
[ ]jp_z0_25Ya.seq2015-04-17 18:19 251 Sequence data file
[TXT]d3swoa1.name2015-04-17 18:19 0 Job name flag file
[ ]jp_z0_25Ya.fasta2015-04-17 20:09 251 Input query sequence in FASTA format
[TXT]jp_z0_25Ya.profile2015-04-17 20:38 38KPSIBLAST profile from alignment
[ ]jp_z0_25Ya.blast.gz2015-04-17 20:40 12MCompressed PSIBLAST output file
[ ]jp_z0_25Ya.full_MSA.fasta2015-04-17 20:41 19MFull MSA before JPred filters in FASTA
[ ]jp_z0_25Ya.align2015-04-17 20:42 197KPSIBLAST alignment in FASTA format
[ ]jp_z0_25Ya.pssm2015-04-17 20:42 50KPSIBLAST PSSM for Jnet
[ ]jp_z0_25Ya.hmm2015-04-17 20:42 44KHHMer2 profile of the alignment
[ ]jp_z0_25Ya.jnet2015-04-17 20:42 8.6KJnet secondary structure output
[ ]jp_z0_25Ya.coilseq.lupas_212015-04-17 20:42 9.9KCOILS output, window length 21
[ ]jp_z0_25Ya.coilseq.lupas_142015-04-17 20:42 9.9KCOILS output, window length 14
[ ]jp_z0_25Ya.coilseq.lupas_282015-04-17 20:42 9.9KCOILS output, window length 28
[TXT]jp_z0_25Ya.coils.csv2015-04-17 20:42 1.4KCOILS output in CSV format
[ ]jp_z0_25Ya.concise2015-04-17 20:42 391KPrediction: coiled-coil, solvent, alignment
[TXT]jp_z0_25Ya.html2015-04-17 20:42 370KHTML prediction and alignment data
[TXT]jp_z0_25Ya.simple.html2015-04-17 20:42 1.7KBrief HTML: sequence and prediction only
[ ]jp_z0_25Ya.jalview2015-04-17 20:42 5.5KJalview annotation file for alignment
[ ]jp_z0_25Ya.concise.fasta2015-04-17 20:42 200KPrediction: coiled-coil, solvent, alignment
[ ]jp_z0_25Ya.concise.blc2015-04-17 20:42 198KBLC format prediction and alignment data
[TXT]jp_z0_25Ya.als2015-04-17 20:42 3.4KAlscript command file for PS/PDF output
[ ]jp_z0_25Ya.concise.ps2015-04-17 20:42 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_z0_25Ya.concise.pdf2015-04-17 20:43 1.3MPDF prediction and alignment data
[TXT]jp_z0_25Ya.full_MSA.fasta.withGaps.html2015-04-17 20:43 69MFull MSA before JPred filters in FASTA
[TXT]jp_z0_25Ya.full_MSA.fasta.noGaps.html2015-04-17 20:43 3.5MFull MSA before JPred filters in FASTA
[TXT]jp_z0_25Ya.svg.html2015-04-17 20:43 93KJalview SVG summary of results
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[ ]jp_z0_25Ya.tar.gz2015-04-17 20:43 22MArchive containing complete results
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_z0_25Ya.results.html2016-02-15 12:21 102KJPred results page
[TXT]jp_z0_25Ya.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_z0_25Ya.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.