JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3tg0a_.name2015-04-17 17:42 0 Job name flag file
[ ]jp_jMM8QN6.align2015-04-17 19:13 479KPSIBLAST alignment in FASTA format
[TXT]jp_jMM8QN6.als2015-04-17 19:13 5.0KAlscript command file for PS/PDF output
[ ]jp_jMM8QN6.blast.gz2015-04-17 19:11 10MCompressed PSIBLAST output file
[TXT]jp_jMM8QN6.coils.csv2015-04-17 19:13 2.6KCOILS output in CSV format
[ ]jp_jMM8QN6.coilseq.lupas_142015-04-17 19:13 18KCOILS output, window length 14
[ ]jp_jMM8QN6.coilseq.lupas_212015-04-17 19:13 18KCOILS output, window length 21
[ ]jp_jMM8QN6.coilseq.lupas_282015-04-17 19:13 18KCOILS output, window length 28
[ ]jp_jMM8QN6.concise2015-04-17 19:13 952KPrediction: coiled-coil, solvent, alignment
[ ]jp_jMM8QN6.concise.blc2015-04-17 19:13 478KBLC format prediction and alignment data
[ ]jp_jMM8QN6.concise.fasta2015-04-17 19:13 483KPrediction: coiled-coil, solvent, alignment
[ ]jp_jMM8QN6.concise.pdf2015-04-17 19:14 3.0MPDF prediction and alignment data
[ ]jp_jMM8QN6.concise.ps2015-04-17 19:13 59MPrediction: coiled-coil, solvent, alignment
[ ]jp_jMM8QN6.fasta2015-04-17 19:04 459 Input query sequence in FASTA format
[ ]jp_jMM8QN6.full_MSA.fasta2015-04-17 19:12 21MFull MSA before JPred filters in FASTA
[TXT]jp_jMM8QN6.full_MSA.fasta.noGaps.html2015-04-17 19:15 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_jMM8QN6.full_MSA.fasta.withGaps.html2015-04-17 19:15 47MFull MSA before JPred filters in FASTA
[ ]jp_jMM8QN6.hmm2015-04-17 19:13 83KHHMer2 profile of the alignment
[TXT]jp_jMM8QN6.html2015-04-17 19:13 711KHTML prediction and alignment data
[ ]jp_jMM8QN6.input2015-04-17 17:42 447 Raw input data for analysis
[ ]jp_jMM8QN6.jalview2015-04-17 19:13 9.5KJalview annotation file for alignment
[ ]jp_jMM8QN6.jnet2015-04-17 19:13 16KJnet secondary structure output
[TXT]jp_jMM8QN6.profile2015-04-17 19:09 70KPSIBLAST profile from alignment
[ ]jp_jMM8QN6.pssm2015-04-17 19:13 95KPSIBLAST PSSM for Jnet
[TXT]jp_jMM8QN6.results.html2016-02-15 12:21 180KJPred results page
[TXT]jp_jMM8QN6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_jMM8QN6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_jMM8QN6.seq2015-04-17 17:42 459 Sequence data file
[TXT]jp_jMM8QN6.simple.html2015-04-17 19:13 2.3KBrief HTML: sequence and prediction only
[TXT]jp_jMM8QN6.svg.html2015-04-17 19:15 172KJalview SVG summary of results
[ ]jp_jMM8QN6.tar.gz2015-04-17 19:15 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.