JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3tn2a_.name2015-04-17 17:05 0 Job name flag file
[ ]jp_NOwtuDQ.align2015-04-17 18:15 98KPSIBLAST alignment in FASTA format
[TXT]jp_NOwtuDQ.als2015-04-17 18:15 2.0KAlscript command file for PS/PDF output
[ ]jp_NOwtuDQ.blast.gz2015-04-17 18:13 412KCompressed PSIBLAST output file
[TXT]jp_NOwtuDQ.coils.csv2015-04-17 18:15 438 COILS output in CSV format
[ ]jp_NOwtuDQ.coilseq.lupas_142015-04-17 18:15 2.9KCOILS output, window length 14
[ ]jp_NOwtuDQ.coilseq.lupas_212015-04-17 18:15 2.9KCOILS output, window length 21
[ ]jp_NOwtuDQ.coilseq.lupas_282015-04-17 18:15 2.9KCOILS output, window length 28
[ ]jp_NOwtuDQ.concise2015-04-17 18:15 185KPrediction: coiled-coil, solvent, alignment
[ ]jp_NOwtuDQ.concise.blc2015-04-17 18:15 98KBLC format prediction and alignment data
[ ]jp_NOwtuDQ.concise.fasta2015-04-17 18:15 99KPrediction: coiled-coil, solvent, alignment
[ ]jp_NOwtuDQ.concise.pdf2015-04-17 18:15 565KPDF prediction and alignment data
[ ]jp_NOwtuDQ.concise.ps2015-04-17 18:15 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_NOwtuDQ.fasta2015-04-17 18:07 81 Input query sequence in FASTA format
[ ]jp_NOwtuDQ.full_MSA.fasta2015-04-17 18:13 608KFull MSA before JPred filters in FASTA
[TXT]jp_NOwtuDQ.full_MSA.fasta.noGaps.html2015-04-17 18:15 387KFull MSA before JPred filters in FASTA
[TXT]jp_NOwtuDQ.full_MSA.fasta.withGaps.html2015-04-17 18:15 3.5MFull MSA before JPred filters in FASTA
[ ]jp_NOwtuDQ.hmm2015-04-17 18:15 13KHHMer2 profile of the alignment
[TXT]jp_NOwtuDQ.html2015-04-17 18:15 321KHTML prediction and alignment data
[ ]jp_NOwtuDQ.input2015-04-17 17:05 75 Raw input data for analysis
[ ]jp_NOwtuDQ.jalview2015-04-17 18:15 2.2KJalview annotation file for alignment
[ ]jp_NOwtuDQ.jnet2015-04-17 18:15 2.6KJnet secondary structure output
[TXT]jp_NOwtuDQ.profile2015-04-17 18:11 11KPSIBLAST profile from alignment
[ ]jp_NOwtuDQ.pssm2015-04-17 18:15 15KPSIBLAST PSSM for Jnet
[TXT]jp_NOwtuDQ.results.html2016-02-15 12:21 38KJPred results page
[TXT]jp_NOwtuDQ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_NOwtuDQ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_NOwtuDQ.seq2015-04-17 17:05 81 Sequence data file
[TXT]jp_NOwtuDQ.simple.html2015-04-17 18:15 1.1KBrief HTML: sequence and prediction only
[TXT]jp_NOwtuDQ.svg.html2015-04-17 18:15 30KJalview SVG summary of results
[ ]jp_NOwtuDQ.tar.gz2015-04-17 18:15 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.