JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:37 4.9KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4a2va_.name2015-04-17 15:52 0 Job name flag file
[ ]jp_e0xJRq6.align2015-04-17 16:37 24KPSIBLAST alignment in FASTA format
[TXT]jp_e0xJRq6.als2015-04-17 16:37 2.7KAlscript command file for PS/PDF output
[ ]jp_e0xJRq6.blast.gz2015-04-17 16:37 117KCompressed PSIBLAST output file
[TXT]jp_e0xJRq6.coils.csv2015-04-17 16:37 762 COILS output in CSV format
[ ]jp_e0xJRq6.coilseq.lupas_142015-04-17 16:37 5.1KCOILS output, window length 14
[ ]jp_e0xJRq6.coilseq.lupas_212015-04-17 16:37 5.1KCOILS output, window length 21
[ ]jp_e0xJRq6.coilseq.lupas_282015-04-17 16:37 5.1KCOILS output, window length 28
[ ]jp_e0xJRq6.concise2015-04-17 16:37 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_e0xJRq6.concise.blc2015-04-17 16:37 26KBLC format prediction and alignment data
[ ]jp_e0xJRq6.concise.fasta2015-04-17 16:37 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_e0xJRq6.concise.pdf2015-04-17 16:37 2.2KPDF prediction and alignment data
[ ]jp_e0xJRq6.concise.ps2015-04-17 16:37 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_e0xJRq6.fasta2015-04-17 16:07 136 Input query sequence in FASTA format
[ ]jp_e0xJRq6.full_MSA.fasta2015-04-17 16:37 137KFull MSA before JPred filters in FASTA
[TXT]jp_e0xJRq6.full_MSA.fasta.noGaps.html2015-04-17 16:37 94KFull MSA before JPred filters in FASTA
[TXT]jp_e0xJRq6.full_MSA.fasta.withGaps.html2015-04-17 16:37 721KFull MSA before JPred filters in FASTA
[ ]jp_e0xJRq6.hmm2015-04-17 16:37 23KHHMer2 profile of the alignment
[TXT]jp_e0xJRq6.html2015-04-17 16:37 68KHTML prediction and alignment data
[ ]jp_e0xJRq6.input2015-04-17 15:52 129 Raw input data for analysis
[ ]jp_e0xJRq6.jalview2015-04-17 16:37 3.2KJalview annotation file for alignment
[ ]jp_e0xJRq6.jnet2015-04-17 16:37 4.5KJnet secondary structure output
[TXT]jp_e0xJRq6.profile2015-04-17 16:27 20KPSIBLAST profile from alignment
[ ]jp_e0xJRq6.pssm2015-04-17 16:37 26KPSIBLAST PSSM for Jnet
[TXT]jp_e0xJRq6.results.html2016-02-15 12:21 59KJPred results page
[TXT]jp_e0xJRq6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_e0xJRq6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_e0xJRq6.seq2015-04-17 15:52 136 Sequence data file
[TXT]jp_e0xJRq6.simple.html2015-04-17 16:37 1.4KBrief HTML: sequence and prediction only
[TXT]jp_e0xJRq6.svg.html2015-04-17 16:37 51KJalview SVG summary of results
[ ]jp_e0xJRq6.tar.gz2015-04-17 16:37 299KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.