A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:13 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d4af1a1.name | 2015-04-17 18:19 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_S6PUdZ_.align | 2015-04-17 20:12 | 28K | PSIBLAST alignment in FASTA format |
| jp_S6PUdZ_.als | 2015-04-17 20:12 | 2.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_S6PUdZ_.blast.gz | 2015-04-17 20:12 | 143K | Compressed PSIBLAST output file |
| jp_S6PUdZ_.coils.csv | 2015-04-17 20:12 | 858 | COILS output in CSV format |
| jp_S6PUdZ_.coilseq.lupas_14 | 2015-04-17 20:12 | 5.8K | COILS output, window length 14 |
| jp_S6PUdZ_.coilseq.lupas_21 | 2015-04-17 20:12 | 5.8K | COILS output, window length 21 |
| jp_S6PUdZ_.coilseq.lupas_28 | 2015-04-17 20:12 | 5.8K | COILS output, window length 28 |
| jp_S6PUdZ_.concise | 2015-04-17 20:12 | 60K | Prediction: coiled-coil, solvent, alignment |
| jp_S6PUdZ_.concise.blc | 2015-04-17 20:12 | 30K | BLC format prediction and alignment data |
| jp_S6PUdZ_.concise.fasta | 2015-04-17 20:12 | 30K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_S6PUdZ_.concise.pdf | 2015-04-17 20:12 | 194K | PDF prediction and alignment data |
| jp_S6PUdZ_.concise.ps | 2015-04-17 20:12 | 3.5M | Prediction: coiled-coil, solvent, alignment |
| jp_S6PUdZ_.fasta | 2015-04-17 20:10 | 152 | Input query sequence in FASTA format |
| jp_S6PUdZ_.full_MSA.fasta | 2015-04-17 20:12 | 168K | Full MSA before JPred filters in FASTA |
| jp_S6PUdZ_.full_MSA.fasta.noGaps.html | 2015-04-17 20:13 | 135K | Full MSA before JPred filters in FASTA |
| jp_S6PUdZ_.full_MSA.fasta.withGaps.html | 2015-04-17 20:13 | 595K | Full MSA before JPred filters in FASTA |
| jp_S6PUdZ_.hmm | 2015-04-17 20:12 | 26K | HHMer2 profile of the alignment |
| jp_S6PUdZ_.html | 2015-04-17 20:12 | 78K | HTML prediction and alignment data |
| jp_S6PUdZ_.input | 2015-04-17 18:19 | 145 | Raw input data for analysis |
| jp_S6PUdZ_.jalview | 2015-04-17 20:12 | 3.6K | Jalview annotation file for alignment |
| jp_S6PUdZ_.jnet | 2015-04-17 20:12 | 5.1K | Jnet secondary structure output |
| jp_S6PUdZ_.profile | 2015-04-17 20:12 | 22K | PSIBLAST profile from alignment |
| jp_S6PUdZ_.pssm | 2015-04-17 20:12 | 30K | PSIBLAST PSSM for Jnet |
| jp_S6PUdZ_.results.html | 2016-02-15 12:21 | 64K | JPred results page |
| jp_S6PUdZ_.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_S6PUdZ_.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_S6PUdZ_.seq | 2015-04-17 18:19 | 152 | Sequence data file |
| jp_S6PUdZ_.simple.html | 2015-04-17 20:12 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_S6PUdZ_.svg.html) | jp_S6PUdZ_.svg.html | 2015-04-17 20:13 | 56K | Jalview SVG summary of results |
| jp_S6PUdZ_.tar.gz | 2015-04-17 20:13 | 469K | Archive containing complete results |
