JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4e29a_.name2015-04-17 17:43 0 Job name flag file
[ ]jp_0l380PG.align2015-04-17 19:10 77KPSIBLAST alignment in FASTA format
[TXT]jp_0l380PG.als2015-04-17 19:10 2.4KAlscript command file for PS/PDF output
[ ]jp_0l380PG.blast.gz2015-04-17 19:10 408KCompressed PSIBLAST output file
[TXT]jp_0l380PG.coils.csv2015-04-17 19:10 1.4KCOILS output in CSV format
[ ]jp_0l380PG.coilseq.lupas_142015-04-17 19:10 9.7KCOILS output, window length 14
[ ]jp_0l380PG.coilseq.lupas_212015-04-17 19:10 9.7KCOILS output, window length 21
[ ]jp_0l380PG.coilseq.lupas_282015-04-17 19:10 9.7KCOILS output, window length 28
[ ]jp_0l380PG.concise2015-04-17 19:10 159KPrediction: coiled-coil, solvent, alignment
[ ]jp_0l380PG.concise.blc2015-04-17 19:10 79KBLC format prediction and alignment data
[ ]jp_0l380PG.concise.fasta2015-04-17 19:10 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_0l380PG.concise.pdf2015-04-17 19:10 559KPDF prediction and alignment data
[ ]jp_0l380PG.concise.ps2015-04-17 19:10 9.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_0l380PG.fasta2015-04-17 19:05 248 Input query sequence in FASTA format
[ ]jp_0l380PG.full_MSA.fasta2015-04-17 19:10 922KFull MSA before JPred filters in FASTA
[TXT]jp_0l380PG.full_MSA.fasta.noGaps.html2015-04-17 19:10 162KFull MSA before JPred filters in FASTA
[TXT]jp_0l380PG.full_MSA.fasta.withGaps.html2015-04-17 19:10 2.3MFull MSA before JPred filters in FASTA
[ ]jp_0l380PG.hmm2015-04-17 19:10 44KHHMer2 profile of the alignment
[TXT]jp_0l380PG.html2015-04-17 19:10 160KHTML prediction and alignment data
[ ]jp_0l380PG.input2015-04-17 17:43 239 Raw input data for analysis
[ ]jp_0l380PG.jalview2015-04-17 19:10 5.6KJalview annotation file for alignment
[ ]jp_0l380PG.jnet2015-04-17 19:10 8.5KJnet secondary structure output
[TXT]jp_0l380PG.profile2015-04-17 19:08 37KPSIBLAST profile from alignment
[ ]jp_0l380PG.pssm2015-04-17 19:10 50KPSIBLAST PSSM for Jnet
[TXT]jp_0l380PG.results.html2016-02-15 12:21 97KJPred results page
[TXT]jp_0l380PG.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_0l380PG.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_0l380PG.seq2015-04-17 17:43 248 Sequence data file
[TXT]jp_0l380PG.simple.html2015-04-17 19:10 1.5KBrief HTML: sequence and prediction only
[TXT]jp_0l380PG.svg.html2015-04-17 19:10 89KJalview SVG summary of results
[ ]jp_0l380PG.tar.gz2015-04-17 19:10 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.