JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4eada2.name2015-04-17 15:52 0 Job name flag file
[ ]jp_4fKl5NJ.align2015-04-17 16:14 246KPSIBLAST alignment in FASTA format
[TXT]jp_4fKl5NJ.als2015-04-17 16:14 3.4KAlscript command file for PS/PDF output
[ ]jp_4fKl5NJ.blast.gz2015-04-17 16:12 4.1MCompressed PSIBLAST output file
[TXT]jp_4fKl5NJ.coils.csv2015-04-17 16:14 1.6KCOILS output in CSV format
[ ]jp_4fKl5NJ.coilseq.lupas_142015-04-17 16:14 11KCOILS output, window length 14
[ ]jp_4fKl5NJ.coilseq.lupas_212015-04-17 16:14 11KCOILS output, window length 21
[ ]jp_4fKl5NJ.coilseq.lupas_282015-04-17 16:14 11KCOILS output, window length 28
[ ]jp_4fKl5NJ.concise2015-04-17 16:14 487KPrediction: coiled-coil, solvent, alignment
[ ]jp_4fKl5NJ.concise.blc2015-04-17 16:14 246KBLC format prediction and alignment data
[ ]jp_4fKl5NJ.concise.fasta2015-04-17 16:14 248KPrediction: coiled-coil, solvent, alignment
[ ]jp_4fKl5NJ.concise.pdf2015-04-17 16:14 1.7MPDF prediction and alignment data
[ ]jp_4fKl5NJ.concise.ps2015-04-17 16:14 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_4fKl5NJ.fasta2015-04-17 16:08 281 Input query sequence in FASTA format
[ ]jp_4fKl5NJ.full_MSA.fasta2015-04-17 16:13 17MFull MSA before JPred filters in FASTA
[TXT]jp_4fKl5NJ.full_MSA.fasta.noGaps.html2015-04-17 16:14 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_4fKl5NJ.full_MSA.fasta.withGaps.html2015-04-17 16:14 43MFull MSA before JPred filters in FASTA
[ ]jp_4fKl5NJ.hmm2015-04-17 16:14 50KHHMer2 profile of the alignment
[TXT]jp_4fKl5NJ.html2015-04-17 16:14 437KHTML prediction and alignment data
[ ]jp_4fKl5NJ.input2015-04-17 15:52 272 Raw input data for analysis
[ ]jp_4fKl5NJ.jalview2015-04-17 16:14 6.1KJalview annotation file for alignment
[ ]jp_4fKl5NJ.jnet2015-04-17 16:14 9.7KJnet secondary structure output
[TXT]jp_4fKl5NJ.profile2015-04-17 16:11 42KPSIBLAST profile from alignment
[ ]jp_4fKl5NJ.pssm2015-04-17 16:14 57KPSIBLAST PSSM for Jnet
[TXT]jp_4fKl5NJ.results.html2016-02-15 12:21 114KJPred results page
[TXT]jp_4fKl5NJ.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_4fKl5NJ.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_4fKl5NJ.seq2015-04-17 15:52 281 Sequence data file
[TXT]jp_4fKl5NJ.simple.html2015-04-17 16:14 1.7KBrief HTML: sequence and prediction only
[TXT]jp_4fKl5NJ.svg.html2015-04-17 16:15 106KJalview SVG summary of results
[ ]jp_4fKl5NJ.tar.gz2015-04-17 16:15 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.