JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4ee6a_.name2015-04-17 17:07 0 Job name flag file
[ ]jp_qu_rhPv.align2015-04-17 18:13 12KPSIBLAST alignment in FASTA format
[TXT]jp_qu_rhPv.als2015-04-17 18:13 4.3KAlscript command file for PS/PDF output
[ ]jp_qu_rhPv.blast.gz2015-04-17 18:13 32KCompressed PSIBLAST output file
[TXT]jp_qu_rhPv.coils.csv2015-04-17 18:13 1.7KCOILS output in CSV format
[ ]jp_qu_rhPv.coilseq.lupas_142015-04-17 18:13 12KCOILS output, window length 14
[ ]jp_qu_rhPv.coilseq.lupas_212015-04-17 18:13 12KCOILS output, window length 21
[ ]jp_qu_rhPv.coilseq.lupas_282015-04-17 18:13 12KCOILS output, window length 28
[ ]jp_qu_rhPv.concise2015-04-17 18:13 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_qu_rhPv.concise.blc2015-04-17 18:13 16KBLC format prediction and alignment data
[ ]jp_qu_rhPv.concise.fasta2015-04-17 18:13 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_qu_rhPv.concise.pdf2015-04-17 18:13 117KPDF prediction and alignment data
[ ]jp_qu_rhPv.concise.ps2015-04-17 18:13 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_qu_rhPv.fasta2015-04-17 18:08 305 Input query sequence in FASTA format
[ ]jp_qu_rhPv.full_MSA.fasta2015-04-17 18:13 21KFull MSA before JPred filters in FASTA
[TXT]jp_qu_rhPv.full_MSA.fasta.noGaps.html2015-04-17 18:13 21KFull MSA before JPred filters in FASTA
[TXT]jp_qu_rhPv.full_MSA.fasta.withGaps.html2015-04-17 18:13 83KFull MSA before JPred filters in FASTA
[ ]jp_qu_rhPv.hmm2015-04-17 18:13 54KHHMer2 profile of the alignment
[TXT]jp_qu_rhPv.html2015-04-17 18:13 48KHTML prediction and alignment data
[ ]jp_qu_rhPv.input2015-04-17 17:07 295 Raw input data for analysis
[ ]jp_qu_rhPv.jalview2015-04-17 18:13 6.6KJalview annotation file for alignment
[ ]jp_qu_rhPv.jnet2015-04-17 18:13 11KJnet secondary structure output
[TXT]jp_qu_rhPv.profile2015-04-17 18:12 46KPSIBLAST profile from alignment
[ ]jp_qu_rhPv.pssm2015-04-17 18:13 62KPSIBLAST PSSM for Jnet
[TXT]jp_qu_rhPv.results.html2016-02-15 12:21 124KJPred results page
[TXT]jp_qu_rhPv.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_qu_rhPv.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_qu_rhPv.seq2015-04-17 17:07 305 Sequence data file
[TXT]jp_qu_rhPv.simple.html2015-04-17 18:13 2.0KBrief HTML: sequence and prediction only
[TXT]jp_qu_rhPv.svg.html2015-04-17 18:13 116KJalview SVG summary of results
[ ]jp_qu_rhPv.tar.gz2015-04-17 18:13 255KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.