JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4egua_.name2015-04-17 18:57 0 Job name flag file
[ ]jp_LOe0P_G.align2015-04-17 21:13 121KPSIBLAST alignment in FASTA format
[TXT]jp_LOe0P_G.als2015-04-17 21:13 2.1KAlscript command file for PS/PDF output
[ ]jp_LOe0P_G.blast.gz2015-04-17 21:12 5.7MCompressed PSIBLAST output file
[TXT]jp_LOe0P_G.coils.csv2015-04-17 21:13 738 COILS output in CSV format
[ ]jp_LOe0P_G.coilseq.lupas_142015-04-17 21:13 5.0KCOILS output, window length 14
[ ]jp_LOe0P_G.coilseq.lupas_212015-04-17 21:13 5.0KCOILS output, window length 21
[ ]jp_LOe0P_G.coilseq.lupas_282015-04-17 21:13 5.0KCOILS output, window length 28
[ ]jp_LOe0P_G.concise2015-04-17 21:13 235KPrediction: coiled-coil, solvent, alignment
[ ]jp_LOe0P_G.concise.blc2015-04-17 21:13 121KBLC format prediction and alignment data
[ ]jp_LOe0P_G.concise.fasta2015-04-17 21:13 122KPrediction: coiled-coil, solvent, alignment
[ ]jp_LOe0P_G.concise.pdf2015-04-17 21:13 833KPDF prediction and alignment data
[ ]jp_LOe0P_G.concise.ps2015-04-17 21:13 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_LOe0P_G.fasta2015-04-17 21:05 132 Input query sequence in FASTA format
[ ]jp_LOe0P_G.full_MSA.fasta2015-04-17 21:13 12MFull MSA before JPred filters in FASTA
[TXT]jp_LOe0P_G.full_MSA.fasta.noGaps.html2015-04-17 21:14 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_LOe0P_G.full_MSA.fasta.withGaps.html2015-04-17 21:14 32MFull MSA before JPred filters in FASTA
[ ]jp_LOe0P_G.hmm2015-04-17 21:13 22KHHMer2 profile of the alignment
[TXT]jp_LOe0P_G.html2015-04-17 21:13 303KHTML prediction and alignment data
[ ]jp_LOe0P_G.input2015-04-17 18:57 125 Raw input data for analysis
[ ]jp_LOe0P_G.jalview2015-04-17 21:13 3.2KJalview annotation file for alignment
[ ]jp_LOe0P_G.jnet2015-04-17 21:13 4.4KJnet secondary structure output
[TXT]jp_LOe0P_G.profile2015-04-17 21:10 19KPSIBLAST profile from alignment
[ ]jp_LOe0P_G.pssm2015-04-17 21:13 25KPSIBLAST PSSM for Jnet
[TXT]jp_LOe0P_G.results.html2016-02-15 12:21 56KJPred results page
[TXT]jp_LOe0P_G.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_LOe0P_G.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_LOe0P_G.seq2015-04-17 18:57 132 Sequence data file
[TXT]jp_LOe0P_G.simple.html2015-04-17 21:13 1.2KBrief HTML: sequence and prediction only
[TXT]jp_LOe0P_G.svg.html2015-04-17 21:14 48KJalview SVG summary of results
[ ]jp_LOe0P_G.tar.gz2015-04-17 21:14 9.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.