JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4fyxb1.name2015-04-17 15:53 0 Job name flag file
[ ]jp_CSEPGJL.align2015-04-17 16:12 41KPSIBLAST alignment in FASTA format
[TXT]jp_CSEPGJL.als2015-04-17 16:12 2.3KAlscript command file for PS/PDF output
[ ]jp_CSEPGJL.blast.gz2015-04-17 16:12 153KCompressed PSIBLAST output file
[TXT]jp_CSEPGJL.coils.csv2015-04-17 16:12 600 COILS output in CSV format
[ ]jp_CSEPGJL.coilseq.lupas_142015-04-17 16:12 4.0KCOILS output, window length 14
[ ]jp_CSEPGJL.coilseq.lupas_212015-04-17 16:12 4.0KCOILS output, window length 21
[ ]jp_CSEPGJL.coilseq.lupas_282015-04-17 16:12 4.0KCOILS output, window length 28
[ ]jp_CSEPGJL.concise2015-04-17 16:12 81KPrediction: coiled-coil, solvent, alignment
[ ]jp_CSEPGJL.concise.blc2015-04-17 16:12 41KBLC format prediction and alignment data
[ ]jp_CSEPGJL.concise.fasta2015-04-17 16:12 42KPrediction: coiled-coil, solvent, alignment
[ ]jp_CSEPGJL.concise.pdf2015-04-17 16:13 286KPDF prediction and alignment data
[ ]jp_CSEPGJL.concise.ps2015-04-17 16:12 4.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_CSEPGJL.fasta2015-04-17 16:10 109 Input query sequence in FASTA format
[ ]jp_CSEPGJL.full_MSA.fasta2015-04-17 16:12 148KFull MSA before JPred filters in FASTA
[TXT]jp_CSEPGJL.full_MSA.fasta.noGaps.html2015-04-17 16:13 164KFull MSA before JPred filters in FASTA
[TXT]jp_CSEPGJL.full_MSA.fasta.withGaps.html2015-04-17 16:13 711KFull MSA before JPred filters in FASTA
[ ]jp_CSEPGJL.hmm2015-04-17 16:12 18KHHMer2 profile of the alignment
[TXT]jp_CSEPGJL.html2015-04-17 16:12 120KHTML prediction and alignment data
[ ]jp_CSEPGJL.input2015-04-17 15:53 102 Raw input data for analysis
[ ]jp_CSEPGJL.jalview2015-04-17 16:12 2.7KJalview annotation file for alignment
[ ]jp_CSEPGJL.jnet2015-04-17 16:12 3.5KJnet secondary structure output
[TXT]jp_CSEPGJL.profile2015-04-17 16:11 16KPSIBLAST profile from alignment
[ ]jp_CSEPGJL.pssm2015-04-17 16:12 20KPSIBLAST PSSM for Jnet
[TXT]jp_CSEPGJL.results.html2016-02-15 12:21 48KJPred results page
[TXT]jp_CSEPGJL.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_CSEPGJL.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_CSEPGJL.seq2015-04-17 15:53 109 Sequence data file
[TXT]jp_CSEPGJL.simple.html2015-04-17 16:12 1.2KBrief HTML: sequence and prediction only
[TXT]jp_CSEPGJL.svg.html2015-04-17 16:13 40KJalview SVG summary of results
[ ]jp_CSEPGJL.tar.gz2015-04-17 16:13 602KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.