JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:48 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4hl2a_.name2015-04-17 18:21 0 Job name flag file
[ ]jp_EhNNqlA.align2015-04-17 20:46 246KPSIBLAST alignment in FASTA format
[TXT]jp_EhNNqlA.als2015-04-17 20:46 3.5KAlscript command file for PS/PDF output
[ ]jp_EhNNqlA.blast.gz2015-04-17 20:42 16MCompressed PSIBLAST output file
[TXT]jp_EhNNqlA.coils.csv2015-04-17 20:46 1.5KCOILS output in CSV format
[ ]jp_EhNNqlA.coilseq.lupas_142015-04-17 20:46 10KCOILS output, window length 14
[ ]jp_EhNNqlA.coilseq.lupas_212015-04-17 20:46 10KCOILS output, window length 21
[ ]jp_EhNNqlA.coilseq.lupas_282015-04-17 20:46 10KCOILS output, window length 28
[ ]jp_EhNNqlA.concise2015-04-17 20:46 485KPrediction: coiled-coil, solvent, alignment
[ ]jp_EhNNqlA.concise.blc2015-04-17 20:46 246KBLC format prediction and alignment data
[ ]jp_EhNNqlA.concise.fasta2015-04-17 20:46 248KPrediction: coiled-coil, solvent, alignment
[ ]jp_EhNNqlA.concise.pdf2015-04-17 20:47 1.7MPDF prediction and alignment data
[ ]jp_EhNNqlA.concise.ps2015-04-17 20:46 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_EhNNqlA.fasta2015-04-17 20:12 259 Input query sequence in FASTA format
[ ]jp_EhNNqlA.full_MSA.fasta2015-04-17 20:44 43MFull MSA before JPred filters in FASTA
[TXT]jp_EhNNqlA.full_MSA.fasta.noGaps.html2015-04-17 20:48 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_EhNNqlA.full_MSA.fasta.withGaps.html2015-04-17 20:48 99MFull MSA before JPred filters in FASTA
[ ]jp_EhNNqlA.hmm2015-04-17 20:46 46KHHMer2 profile of the alignment
[TXT]jp_EhNNqlA.html2015-04-17 20:46 448KHTML prediction and alignment data
[ ]jp_EhNNqlA.input2015-04-17 18:21 250 Raw input data for analysis
[ ]jp_EhNNqlA.jalview2015-04-17 20:46 5.6KJalview annotation file for alignment
[ ]jp_EhNNqlA.jnet2015-04-17 20:46 8.9KJnet secondary structure output
[TXT]jp_EhNNqlA.profile2015-04-17 20:36 39KPSIBLAST profile from alignment
[ ]jp_EhNNqlA.pssm2015-04-17 20:46 52KPSIBLAST PSSM for Jnet
[TXT]jp_EhNNqlA.results.html2016-02-15 12:21 105KJPred results page
[TXT]jp_EhNNqlA.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_EhNNqlA.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_EhNNqlA.seq2015-04-17 18:21 259 Sequence data file
[TXT]jp_EhNNqlA.simple.html2015-04-17 20:46 1.7KBrief HTML: sequence and prediction only
[TXT]jp_EhNNqlA.svg.html2015-04-17 20:48 96KJalview SVG summary of results
[ ]jp_EhNNqlA.tar.gz2015-04-17 20:48 28MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.