JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:20 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4hwwa_.name2015-04-17 18:57 0 Job name flag file
[ ]jp_bjpp1Fc.align2015-04-17 21:18 291KPSIBLAST alignment in FASTA format
[TXT]jp_bjpp1Fc.als2015-04-17 21:18 3.7KAlscript command file for PS/PDF output
[ ]jp_bjpp1Fc.blast.gz2015-04-17 21:16 10MCompressed PSIBLAST output file
[TXT]jp_bjpp1Fc.coils.csv2015-04-17 21:18 1.9KCOILS output in CSV format
[ ]jp_bjpp1Fc.coilseq.lupas_142015-04-17 21:18 13KCOILS output, window length 14
[ ]jp_bjpp1Fc.coilseq.lupas_212015-04-17 21:18 13KCOILS output, window length 21
[ ]jp_bjpp1Fc.coilseq.lupas_282015-04-17 21:18 13KCOILS output, window length 28
[ ]jp_bjpp1Fc.concise2015-04-17 21:18 579KPrediction: coiled-coil, solvent, alignment
[ ]jp_bjpp1Fc.concise.blc2015-04-17 21:18 292KBLC format prediction and alignment data
[ ]jp_bjpp1Fc.concise.fasta2015-04-17 21:18 295KPrediction: coiled-coil, solvent, alignment
[ ]jp_bjpp1Fc.concise.pdf2015-04-17 21:19 2.1MPDF prediction and alignment data
[ ]jp_bjpp1Fc.concise.ps2015-04-17 21:19 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_bjpp1Fc.fasta2015-04-17 21:06 331 Input query sequence in FASTA format
[ ]jp_bjpp1Fc.full_MSA.fasta2015-04-17 21:17 18MFull MSA before JPred filters in FASTA
[TXT]jp_bjpp1Fc.full_MSA.fasta.noGaps.html2015-04-17 21:20 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_bjpp1Fc.full_MSA.fasta.withGaps.html2015-04-17 21:20 56MFull MSA before JPred filters in FASTA
[ ]jp_bjpp1Fc.hmm2015-04-17 21:18 59KHHMer2 profile of the alignment
[TXT]jp_bjpp1Fc.html2015-04-17 21:18 490KHTML prediction and alignment data
[ ]jp_bjpp1Fc.input2015-04-17 18:57 321 Raw input data for analysis
[ ]jp_bjpp1Fc.jalview2015-04-17 21:18 7.1KJalview annotation file for alignment
[ ]jp_bjpp1Fc.jnet2015-04-17 21:18 11KJnet secondary structure output
[TXT]jp_bjpp1Fc.profile2015-04-17 21:14 50KPSIBLAST profile from alignment
[ ]jp_bjpp1Fc.pssm2015-04-17 21:18 67KPSIBLAST PSSM for Jnet
[TXT]jp_bjpp1Fc.results.html2016-02-15 12:21 131KJPred results page
[TXT]jp_bjpp1Fc.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_bjpp1Fc.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_bjpp1Fc.seq2015-04-17 18:57 331 Sequence data file
[TXT]jp_bjpp1Fc.simple.html2015-04-17 21:18 1.9KBrief HTML: sequence and prediction only
[TXT]jp_bjpp1Fc.svg.html2015-04-17 21:20 123KJalview SVG summary of results
[ ]jp_bjpp1Fc.tar.gz2015-04-17 21:20 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.