JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:24 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4jxqa_.name2015-04-17 18:58 0 Job name flag file
[ ]jp_SpjgFHd.align2015-04-17 21:23 196KPSIBLAST alignment in FASTA format
[TXT]jp_SpjgFHd.als2015-04-17 21:23 3.0KAlscript command file for PS/PDF output
[ ]jp_SpjgFHd.blast.gz2015-04-17 21:21 8.5MCompressed PSIBLAST output file
[TXT]jp_SpjgFHd.coils.csv2015-04-17 21:23 1.1KCOILS output in CSV format
[ ]jp_SpjgFHd.coilseq.lupas_142015-04-17 21:23 7.8KCOILS output, window length 14
[ ]jp_SpjgFHd.coilseq.lupas_212015-04-17 21:23 7.8KCOILS output, window length 21
[ ]jp_SpjgFHd.coilseq.lupas_282015-04-17 21:23 7.8KCOILS output, window length 28
[ ]jp_SpjgFHd.concise2015-04-17 21:23 384KPrediction: coiled-coil, solvent, alignment
[ ]jp_SpjgFHd.concise.blc2015-04-17 21:23 196KBLC format prediction and alignment data
[ ]jp_SpjgFHd.concise.fasta2015-04-17 21:23 198KPrediction: coiled-coil, solvent, alignment
[ ]jp_SpjgFHd.concise.pdf2015-04-17 21:23 1.3MPDF prediction and alignment data
[ ]jp_SpjgFHd.concise.ps2015-04-17 21:23 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_SpjgFHd.fasta2015-04-17 21:07 200 Input query sequence in FASTA format
[ ]jp_SpjgFHd.full_MSA.fasta2015-04-17 21:22 14MFull MSA before JPred filters in FASTA
[TXT]jp_SpjgFHd.full_MSA.fasta.noGaps.html2015-04-17 21:23 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_SpjgFHd.full_MSA.fasta.withGaps.html2015-04-17 21:23 49MFull MSA before JPred filters in FASTA
[ ]jp_SpjgFHd.hmm2015-04-17 21:23 35KHHMer2 profile of the alignment
[TXT]jp_SpjgFHd.html2015-04-17 21:23 398KHTML prediction and alignment data
[ ]jp_SpjgFHd.input2015-04-17 18:58 192 Raw input data for analysis
[ ]jp_SpjgFHd.jalview2015-04-17 21:23 4.5KJalview annotation file for alignment
[ ]jp_SpjgFHd.jnet2015-04-17 21:23 6.8KJnet secondary structure output
[TXT]jp_SpjgFHd.profile2015-04-17 21:19 30KPSIBLAST profile from alignment
[ ]jp_SpjgFHd.pssm2015-04-17 21:23 40KPSIBLAST PSSM for Jnet
[TXT]jp_SpjgFHd.results.html2016-02-15 12:21 84KJPred results page
[TXT]jp_SpjgFHd.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_SpjgFHd.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_SpjgFHd.seq2015-04-17 18:58 200 Sequence data file
[TXT]jp_SpjgFHd.simple.html2015-04-17 21:23 1.6KBrief HTML: sequence and prediction only
[TXT]jp_SpjgFHd.svg.html2015-04-17 21:24 76KJalview SVG summary of results
[ ]jp_SpjgFHd.tar.gz2015-04-17 21:24 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.