JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:27 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4sgbi_.name2015-04-17 19:53 0 Job name flag file
[ ]jp_kIZ3au_.align2015-04-17 22:27 5.5KPSIBLAST alignment in FASTA format
[TXT]jp_kIZ3au_.als2015-04-17 22:27 1.4KAlscript command file for PS/PDF output
[ ]jp_kIZ3au_.blast.gz2015-04-17 22:27 11KCompressed PSIBLAST output file
[TXT]jp_kIZ3au_.coils.csv2015-04-17 22:27 336 COILS output in CSV format
[ ]jp_kIZ3au_.coilseq.lupas_142015-04-17 22:27 2.1KCOILS output, window length 14
[ ]jp_kIZ3au_.coilseq.lupas_212015-04-17 22:27 2.1KCOILS output, window length 21
[ ]jp_kIZ3au_.coilseq.lupas_282015-04-17 22:27 2.1KCOILS output, window length 28
[ ]jp_kIZ3au_.concise2015-04-17 22:27 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_kIZ3au_.concise.blc2015-04-17 22:27 6.2KBLC format prediction and alignment data
[ ]jp_kIZ3au_.concise.fasta2015-04-17 22:27 6.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_kIZ3au_.concise.pdf2015-04-17 22:27 23KPDF prediction and alignment data
[ ]jp_kIZ3au_.concise.ps2015-04-17 22:27 557KPrediction: coiled-coil, solvent, alignment
[ ]jp_kIZ3au_.fasta2015-04-17 22:23 64 Input query sequence in FASTA format
[ ]jp_kIZ3au_.full_MSA.fasta2015-04-17 22:27 19KFull MSA before JPred filters in FASTA
[TXT]jp_kIZ3au_.full_MSA.fasta.noGaps.html2015-04-17 22:27 37KFull MSA before JPred filters in FASTA
[TXT]jp_kIZ3au_.full_MSA.fasta.withGaps.html2015-04-17 22:27 72KFull MSA before JPred filters in FASTA
[ ]jp_kIZ3au_.hmm2015-04-17 22:27 9.6KHHMer2 profile of the alignment
[TXT]jp_kIZ3au_.html2015-04-17 22:27 26KHTML prediction and alignment data
[ ]jp_kIZ3au_.input2015-04-17 19:53 58 Raw input data for analysis
[ ]jp_kIZ3au_.jalview2015-04-17 22:27 1.8KJalview annotation file for alignment
[ ]jp_kIZ3au_.jnet2015-04-17 22:27 2.0KJnet secondary structure output
[TXT]jp_kIZ3au_.profile2015-04-17 22:26 8.6KPSIBLAST profile from alignment
[ ]jp_kIZ3au_.pssm2015-04-17 22:27 11KPSIBLAST PSSM for Jnet
[TXT]jp_kIZ3au_.results.html2016-02-15 12:21 30KJPred results page
[TXT]jp_kIZ3au_.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_kIZ3au_.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_kIZ3au_.seq2015-04-17 19:53 64 Sequence data file
[TXT]jp_kIZ3au_.simple.html2015-04-17 22:27 1.0KBrief HTML: sequence and prediction only
[TXT]jp_kIZ3au_.svg.html2015-04-17 22:27 22KJalview SVG summary of results
[ ]jp_kIZ3au_.tar.gz2015-04-17 22:27 58KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.