JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_PLZDKD6.tar.gz2015-04-21 10:42 1.6MArchive containing complete results
[TXT]jp_PLZDKD6.svg.html2015-04-21 10:42 37KJalview SVG summary of results
[TXT]jp_PLZDKD6.simple.html2015-04-21 10:42 1.1KBrief HTML: sequence and prediction only
[ ]jp_PLZDKD6.seq2015-04-21 10:39 104 Sequence data file
[TXT]jp_PLZDKD6.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[TXT]jp_PLZDKD6.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_PLZDKD6.results.html2016-02-15 12:22 45KJPred results page
[ ]jp_PLZDKD6.pssm2015-04-21 10:42 19KPSIBLAST PSSM for Jnet
[TXT]jp_PLZDKD6.profile2015-04-21 10:41 15KPSIBLAST profile from alignment
[ ]jp_PLZDKD6.jnet2015-04-21 10:42 3.4KJnet secondary structure output
[ ]jp_PLZDKD6.jalview2015-04-21 10:42 2.6KJalview annotation file for alignment
[ ]jp_PLZDKD6.input2015-04-21 10:39 97 Raw input data for analysis
[TXT]jp_PLZDKD6.html2015-04-21 10:42 170KHTML prediction and alignment data
[ ]jp_PLZDKD6.hmm2015-04-21 10:42 17KHHMer2 profile of the alignment
[TXT]jp_PLZDKD6.full_MSA.fasta.withGaps.html2015-04-21 10:42 4.6MFull MSA before JPred filters in FASTA
[TXT]jp_PLZDKD6.full_MSA.fasta.noGaps.html2015-04-21 10:42 447KFull MSA before JPred filters in FASTA
[ ]jp_PLZDKD6.full_MSA.fasta2015-04-21 10:42 1.2MFull MSA before JPred filters in FASTA
[ ]jp_PLZDKD6.fasta2015-04-21 10:39 104 Input query sequence in FASTA format
[ ]jp_PLZDKD6.concise.ps2015-04-21 10:42 6.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_PLZDKD6.concise.pdf2015-04-21 10:42 366KPDF prediction and alignment data
[ ]jp_PLZDKD6.concise.fasta2015-04-21 10:42 59KPrediction: coiled-coil, solvent, alignment
[ ]jp_PLZDKD6.concise.blc2015-04-21 10:42 58KBLC format prediction and alignment data
[ ]jp_PLZDKD6.concise2015-04-21 10:42 112KPrediction: coiled-coil, solvent, alignment
[ ]jp_PLZDKD6.coilseq.lupas_282015-04-21 10:42 3.8KCOILS output, window length 28
[ ]jp_PLZDKD6.coilseq.lupas_212015-04-21 10:42 3.8KCOILS output, window length 21
[ ]jp_PLZDKD6.coilseq.lupas_142015-04-21 10:42 3.8KCOILS output, window length 14
[TXT]jp_PLZDKD6.coils.csv2015-04-21 10:42 570 COILS output in CSV format
[ ]jp_PLZDKD6.blast.gz2015-04-21 10:42 748KCompressed PSIBLAST output file
[TXT]jp_PLZDKD6.als2015-04-21 10:42 1.9KAlscript command file for PS/PDF output
[ ]jp_PLZDKD6.align2015-04-21 10:42 58KPSIBLAST alignment in FASTA format
[TXT]e1qtn_________1B.name2015-04-21 10:39 0 Job name flag file
[TXT]README2016-02-15 12:22 2.1KResults file descriptions
[TXT]LOG2015-04-21 10:42 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.