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Barton, G. J., (2001), "Creation and Analysis of Protein Multiple Sequence Alignments", In: Bioinformatics, A Practical Guide to the Analysis of Genes and Proteins, Second Edition, 
(Ed. A. D. Baxevanis and B. F. F. Ouellete), John Wiley and Sons, ISBN 0-471-38391-0


Barton, G. J., Russell, R. B., Livingstone, C. D., Copley, R. R. and Siddiqui, A. S. (1998), "Protein Structure Prediction: Meeting the Challenge of Genome Projects", 
Humans to Proteins: Advances in Computational Life Sciences, Vol 2., 
(Ed. M. T. Michalewicz), CSIRO Publishing, Melbourne. ISBN 0 643 06033. 


Barton, G. J. (1996), 
"Protein Sequence Alignment and Database Scanning", 
In: Protein Structure Prediction: A Practical Approach, 
(Ed. M. J. E. Sternberg), IRL Press at Oxford University Press. 
ISBN 0 19 963496 3 

PDF and gzip compressed PostScript preprints of this chapter are available here. 

 


Livingstone & Barton, G. J.(1996), 
"Identification of Functional Residues and Secondary Structure from Protein Multiple Sequence Alignment", Methods. Enzymol., 266497-512 

 


Barton, G. J.(1995), 
"Protein Secondary Structure Prediction", Curr. Opin. Struc. Biol.,5 ,372-376 

 


Barton, G. J.(1994), 
"scop: structural classification of proteins", TIBS, 19 , 519-559. 

 


Barton, G. J.(1994), 
"Electronic Publishing and the Biochemist", The Biochemist, Dec/Jan 1994/5, 9-12. 

This article has also been published as: 

 Barton, G. J. (1995), 
"Electronic Publishing and the Biochemist", Learned Publishing,8, 163--167. 


Barton, G. J. (1994), 
"AMPS - Alignment of Protein Sequences" In: Methods in Molecular Biology - Computer Analysis of Sequence Data, (Eds. A. M. Griffin and H. G. Griffin), HUMANA Press Inc. 

 (25:327-47) A PostScript version of this chapter is availablehere. 

 


Barton, G. J., Livingstone, C. D. and Russell, R. B. (1993), 
"Prediction of Protein Structure from Multiple Sequence Alignment" In: Methods in Protein Sequence Analysis, 209-220, Plenum Press. 

 


Barton, G. J. (1992b), 
"Multiple Sequence Alignment and Flexible Pattern Matching" In: Patterns in Protein Sequence and Structure, (Ed. W. R. Taylor), Springer-Verlag. 

 


Barton, G. J., (1990), 
"Protein Multiple Sequence Alignment and Flexible Pattern Matching",Methods. Enzymol., 183, 403-428. (BBK/ICRF) 

 The AMPS package for multiple alignment and flexible pattern matching is available from here.


Sternberg, M. J. E., Barton, G. J., Islam, S. A., McGregor, M. J., & Zvelebil, M. J. J. (1988), 
"Modelling the Structure and Function of Proteins from their Amino Acid Sequence Using Data Bases", In: Computer Aided Molecular Design, Ed. W. G. Richards, IBC Technical Services Ltd. (BBK) 

 

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This site was last updated: Friday, 22 May, 2009

Geoff Barton, Bioinformatics and Computational Biology Research, University of Dundee, Scotland