JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:21 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1b33n_.name2015-04-17 15:17 0 Job name flag file
[ ]jp_zGwnPKq.align2015-04-17 15:21 1.0KPSIBLAST alignment in FASTA format
[TXT]jp_zGwnPKq.als2015-04-17 15:21 1.9KAlscript command file for PS/PDF output
[ ]jp_zGwnPKq.blast.gz2015-04-17 15:21 3.7KCompressed PSIBLAST output file
[TXT]jp_zGwnPKq.coils.csv2015-04-17 15:21 432 COILS output in CSV format
[ ]jp_zGwnPKq.coilseq.lupas_142015-04-17 15:21 2.8KCOILS output, window length 14
[ ]jp_zGwnPKq.coilseq.lupas_212015-04-17 15:21 2.8KCOILS output, window length 21
[ ]jp_zGwnPKq.coilseq.lupas_282015-04-17 15:21 2.8KCOILS output, window length 28
[ ]jp_zGwnPKq.concise2015-04-17 15:21 4.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_zGwnPKq.concise.blc2015-04-17 15:21 2.1KBLC format prediction and alignment data
[ ]jp_zGwnPKq.concise.fasta2015-04-17 15:21 1.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_zGwnPKq.concise.pdf2015-04-17 15:21 14KPDF prediction and alignment data
[ ]jp_zGwnPKq.concise.ps2015-04-17 15:21 223KPrediction: coiled-coil, solvent, alignment
[ ]jp_zGwnPKq.fasta2015-04-17 15:17 80 Input query sequence in FASTA format
[ ]jp_zGwnPKq.full_MSA.fasta2015-04-17 15:21 3.4KFull MSA before JPred filters in FASTA
[TXT]jp_zGwnPKq.full_MSA.fasta.noGaps.html2015-04-17 15:21 7.8KFull MSA before JPred filters in FASTA
[TXT]jp_zGwnPKq.full_MSA.fasta.withGaps.html2015-04-17 15:21 8.8KFull MSA before JPred filters in FASTA
[ ]jp_zGwnPKq.hmm2015-04-17 15:21 13KHHMer2 profile of the alignment
[TXT]jp_zGwnPKq.html2015-04-17 15:21 11KHTML prediction and alignment data
[ ]jp_zGwnPKq.input2015-04-17 15:17 74 Raw input data for analysis
[ ]jp_zGwnPKq.jalview2015-04-17 15:21 2.2KJalview annotation file for alignment
[ ]jp_zGwnPKq.jnet2015-04-17 15:21 2.5KJnet secondary structure output
[TXT]jp_zGwnPKq.profile2015-04-17 15:20 11KPSIBLAST profile from alignment
[ ]jp_zGwnPKq.pssm2015-04-17 15:21 14KPSIBLAST PSSM for Jnet
[TXT]jp_zGwnPKq.results.html2016-02-15 12:16 37KJPred results page
[TXT]jp_zGwnPKq.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_zGwnPKq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_zGwnPKq.seq2015-04-17 15:17 80 Sequence data file
[TXT]jp_zGwnPKq.simple.html2015-04-17 15:21 1.1KBrief HTML: sequence and prediction only
[TXT]jp_zGwnPKq.svg.html2015-04-17 15:21 29KJalview SVG summary of results
[ ]jp_zGwnPKq.tar.gz2015-04-17 15:21 40KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.