JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:04 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1g3pa1.name2015-04-17 16:34 0 Job name flag file
[ ]jp_Vjs0wIs.align2015-04-17 18:03 1.2KPSIBLAST alignment in FASTA format
[TXT]jp_Vjs0wIs.als2015-04-17 18:04 2.1KAlscript command file for PS/PDF output
[ ]jp_Vjs0wIs.blast.gz2015-04-17 18:03 3.8KCompressed PSIBLAST output file
[TXT]jp_Vjs0wIs.coils.csv2015-04-17 18:04 420 COILS output in CSV format
[ ]jp_Vjs0wIs.coilseq.lupas_142015-04-17 18:04 2.7KCOILS output, window length 14
[ ]jp_Vjs0wIs.coilseq.lupas_212015-04-17 18:04 2.7KCOILS output, window length 21
[ ]jp_Vjs0wIs.coilseq.lupas_282015-04-17 18:04 2.7KCOILS output, window length 28
[ ]jp_Vjs0wIs.concise2015-04-17 18:04 5.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_Vjs0wIs.concise.blc2015-04-17 18:04 2.3KBLC format prediction and alignment data
[ ]jp_Vjs0wIs.concise.fasta2015-04-17 18:04 2.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_Vjs0wIs.concise.pdf2015-04-17 18:04 14KPDF prediction and alignment data
[ ]jp_Vjs0wIs.concise.ps2015-04-17 18:04 235KPrediction: coiled-coil, solvent, alignment
[ ]jp_Vjs0wIs.fasta2015-04-17 17:13 78 Input query sequence in FASTA format
[ ]jp_Vjs0wIs.full_MSA.fasta2015-04-17 18:03 2.3KFull MSA before JPred filters in FASTA
[TXT]jp_Vjs0wIs.full_MSA.fasta.noGaps.html2015-04-17 18:04 5.2KFull MSA before JPred filters in FASTA
[TXT]jp_Vjs0wIs.full_MSA.fasta.withGaps.html2015-04-17 18:04 9.0KFull MSA before JPred filters in FASTA
[ ]jp_Vjs0wIs.hmm2015-04-17 18:03 12KHHMer2 profile of the alignment
[TXT]jp_Vjs0wIs.html2015-04-17 18:04 11KHTML prediction and alignment data
[ ]jp_Vjs0wIs.input2015-04-17 16:34 72 Raw input data for analysis
[ ]jp_Vjs0wIs.jalview2015-04-17 18:04 2.1KJalview annotation file for alignment
[ ]jp_Vjs0wIs.jnet2015-04-17 18:03 2.5KJnet secondary structure output
[TXT]jp_Vjs0wIs.profile2015-04-17 17:44 11KPSIBLAST profile from alignment
[ ]jp_Vjs0wIs.pssm2015-04-17 18:03 14KPSIBLAST PSSM for Jnet
[TXT]jp_Vjs0wIs.results.html2016-02-15 12:17 37KJPred results page
[TXT]jp_Vjs0wIs.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Vjs0wIs.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Vjs0wIs.seq2015-04-17 16:34 78 Sequence data file
[TXT]jp_Vjs0wIs.simple.html2015-04-17 18:04 1.2KBrief HTML: sequence and prediction only
[TXT]jp_Vjs0wIs.svg.html2015-04-17 18:04 29KJalview SVG summary of results
[ ]jp_Vjs0wIs.tar.gz2015-04-17 18:04 41KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.