JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:18 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1gzsb_.name2015-04-17 17:13 0 Job name flag file
[ ]jp_y2uhgRh.align2015-04-17 18:18 2.0KPSIBLAST alignment in FASTA format
[TXT]jp_y2uhgRh.als2015-04-17 18:18 2.4KAlscript command file for PS/PDF output
[ ]jp_y2uhgRh.blast.gz2015-04-17 18:18 6.1KCompressed PSIBLAST output file
[TXT]jp_y2uhgRh.coils.csv2015-04-17 18:18 1.0KCOILS output in CSV format
[ ]jp_y2uhgRh.coilseq.lupas_142015-04-17 18:18 6.9KCOILS output, window length 14
[ ]jp_y2uhgRh.coilseq.lupas_212015-04-17 18:18 6.9KCOILS output, window length 21
[ ]jp_y2uhgRh.coilseq.lupas_282015-04-17 18:18 6.9KCOILS output, window length 28
[ ]jp_y2uhgRh.concise2015-04-17 18:18 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_y2uhgRh.concise.blc2015-04-17 18:18 4.5KBLC format prediction and alignment data
[ ]jp_y2uhgRh.concise.fasta2015-04-17 18:18 3.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_y2uhgRh.concise.pdf2015-04-17 18:18 30KPDF prediction and alignment data
[ ]jp_y2uhgRh.concise.ps2015-04-17 18:18 528KPrediction: coiled-coil, solvent, alignment
[ ]jp_y2uhgRh.fasta2015-04-17 18:16 180 Input query sequence in FASTA format
[ ]jp_y2uhgRh.full_MSA.fasta2015-04-17 18:18 7.6KFull MSA before JPred filters in FASTA
[TXT]jp_y2uhgRh.full_MSA.fasta.noGaps.html2015-04-17 18:18 11KFull MSA before JPred filters in FASTA
[TXT]jp_y2uhgRh.full_MSA.fasta.withGaps.html2015-04-17 18:18 17KFull MSA before JPred filters in FASTA
[ ]jp_y2uhgRh.hmm2015-04-17 18:18 31KHHMer2 profile of the alignment
[TXT]jp_y2uhgRh.html2015-04-17 18:18 22KHTML prediction and alignment data
[ ]jp_y2uhgRh.input2015-04-17 17:13 172 Raw input data for analysis
[ ]jp_y2uhgRh.jalview2015-04-17 18:18 4.2KJalview annotation file for alignment
[ ]jp_y2uhgRh.jnet2015-04-17 18:18 6.1KJnet secondary structure output
[TXT]jp_y2uhgRh.profile2015-04-17 18:17 27KPSIBLAST profile from alignment
[ ]jp_y2uhgRh.pssm2015-04-17 18:18 35KPSIBLAST PSSM for Jnet
[TXT]jp_y2uhgRh.results.html2016-02-15 12:17 75KJPred results page
[TXT]jp_y2uhgRh.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_y2uhgRh.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_y2uhgRh.seq2015-04-17 17:13 180 Sequence data file
[TXT]jp_y2uhgRh.simple.html2015-04-17 18:18 1.4KBrief HTML: sequence and prediction only
[TXT]jp_y2uhgRh.svg.html2015-04-17 18:18 67KJalview SVG summary of results
[ ]jp_y2uhgRh.tar.gz2015-04-17 18:18 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.