JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:26 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1k92a2.name2015-04-17 17:15 0 Job name flag file
[ ]jp_2HW__nB.align2015-04-17 18:25 178KPSIBLAST alignment in FASTA format
[TXT]jp_2HW__nB.als2015-04-17 18:25 3.3KAlscript command file for PS/PDF output
[ ]jp_2HW__nB.blast.gz2015-04-17 18:25 1.6MCompressed PSIBLAST output file
[TXT]jp_2HW__nB.coils.csv2015-04-17 18:25 1.5KCOILS output in CSV format
[ ]jp_2HW__nB.coilseq.lupas_142015-04-17 18:25 11KCOILS output, window length 14
[ ]jp_2HW__nB.coilseq.lupas_212015-04-17 18:25 11KCOILS output, window length 21
[ ]jp_2HW__nB.coilseq.lupas_282015-04-17 18:25 11KCOILS output, window length 28
[ ]jp_2HW__nB.concise2015-04-17 18:25 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_2HW__nB.concise.blc2015-04-17 18:25 179KBLC format prediction and alignment data
[ ]jp_2HW__nB.concise.fasta2015-04-17 18:25 180KPrediction: coiled-coil, solvent, alignment
[ ]jp_2HW__nB.concise.pdf2015-04-17 18:25 1.2MPDF prediction and alignment data
[ ]jp_2HW__nB.concise.ps2015-04-17 18:25 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_2HW__nB.fasta2015-04-17 18:19 272 Input query sequence in FASTA format
[ ]jp_2HW__nB.full_MSA.fasta2015-04-17 18:25 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_2HW__nB.full_MSA.fasta.noGaps.html2015-04-17 18:26 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_2HW__nB.full_MSA.fasta.withGaps.html2015-04-17 18:26 9.6MFull MSA before JPred filters in FASTA
[ ]jp_2HW__nB.hmm2015-04-17 18:25 48KHHMer2 profile of the alignment
[TXT]jp_2HW__nB.html2015-04-17 18:25 327KHTML prediction and alignment data
[ ]jp_2HW__nB.input2015-04-17 17:15 263 Raw input data for analysis
[ ]jp_2HW__nB.jalview2015-04-17 18:25 6.0KJalview annotation file for alignment
[ ]jp_2HW__nB.jnet2015-04-17 18:25 9.4KJnet secondary structure output
[TXT]jp_2HW__nB.profile2015-04-17 18:23 41KPSIBLAST profile from alignment
[ ]jp_2HW__nB.pssm2015-04-17 18:25 55KPSIBLAST PSSM for Jnet
[TXT]jp_2HW__nB.results.html2016-02-15 12:17 109KJPred results page
[TXT]jp_2HW__nB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_2HW__nB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_2HW__nB.seq2015-04-17 17:15 272 Sequence data file
[TXT]jp_2HW__nB.simple.html2015-04-17 18:25 1.7KBrief HTML: sequence and prediction only
[TXT]jp_2HW__nB.svg.html2015-04-17 18:26 101KJalview SVG summary of results
[ ]jp_2HW__nB.tar.gz2015-04-17 18:26 4.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.