JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mtyg_.name2015-04-17 18:27 0 Job name flag file
[ ]jp_LdGyCvs.align2015-04-17 20:53 1.4KPSIBLAST alignment in FASTA format
[TXT]jp_LdGyCvs.als2015-04-17 20:53 2.4KAlscript command file for PS/PDF output
[ ]jp_LdGyCvs.blast.gz2015-04-17 20:53 3.3KCompressed PSIBLAST output file
[TXT]jp_LdGyCvs.coils.csv2015-04-17 20:53 1.0KCOILS output in CSV format
[ ]jp_LdGyCvs.coilseq.lupas_142015-04-17 20:53 6.8KCOILS output, window length 14
[ ]jp_LdGyCvs.coilseq.lupas_212015-04-17 20:53 6.8KCOILS output, window length 21
[ ]jp_LdGyCvs.coilseq.lupas_282015-04-17 20:53 6.8KCOILS output, window length 28
[ ]jp_LdGyCvs.concise2015-04-17 20:53 9.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_LdGyCvs.concise.blc2015-04-17 20:53 3.9KBLC format prediction and alignment data
[ ]jp_LdGyCvs.concise.fasta2015-04-17 20:53 3.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_LdGyCvs.concise.pdf2015-04-17 20:53 28KPDF prediction and alignment data
[ ]jp_LdGyCvs.concise.ps2015-04-17 20:53 464KPrediction: coiled-coil, solvent, alignment
[ ]jp_LdGyCvs.fasta2015-04-17 20:21 177 Input query sequence in FASTA format
[ ]jp_LdGyCvs.full_MSA.fasta2015-04-17 20:53 2.5KFull MSA before JPred filters in FASTA
[TXT]jp_LdGyCvs.full_MSA.fasta.noGaps.html2015-04-17 20:53 4.0KFull MSA before JPred filters in FASTA
[TXT]jp_LdGyCvs.full_MSA.fasta.withGaps.html2015-04-17 20:53 5.4KFull MSA before JPred filters in FASTA
[ ]jp_LdGyCvs.hmm2015-04-17 20:53 30KHHMer2 profile of the alignment
[TXT]jp_LdGyCvs.html2015-04-17 20:53 20KHTML prediction and alignment data
[ ]jp_LdGyCvs.input2015-04-17 18:27 169 Raw input data for analysis
[ ]jp_LdGyCvs.jalview2015-04-17 20:53 4.1KJalview annotation file for alignment
[ ]jp_LdGyCvs.jnet2015-04-17 20:53 6.0KJnet secondary structure output
[TXT]jp_LdGyCvs.profile2015-04-17 20:43 26KPSIBLAST profile from alignment
[ ]jp_LdGyCvs.pssm2015-04-17 20:53 35KPSIBLAST PSSM for Jnet
[TXT]jp_LdGyCvs.results.html2016-02-15 12:17 74KJPred results page
[TXT]jp_LdGyCvs.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_LdGyCvs.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_LdGyCvs.seq2015-04-17 18:27 177 Sequence data file
[TXT]jp_LdGyCvs.simple.html2015-04-17 20:53 1.4KBrief HTML: sequence and prediction only
[TXT]jp_LdGyCvs.svg.html2015-04-17 20:53 66KJalview SVG summary of results
[ ]jp_LdGyCvs.tar.gz2015-04-17 20:53 72KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.