A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:45 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1mwpa_.name | 2015-04-17 16:39 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_xPk1uVp.align | 2015-04-17 17:45 | 8.2K | PSIBLAST alignment in FASTA format |
| jp_xPk1uVp.als | 2015-04-17 17:45 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_xPk1uVp.blast.gz | 2015-04-17 17:45 | 56K | Compressed PSIBLAST output file |
| jp_xPk1uVp.coils.csv | 2015-04-17 17:45 | 606 | COILS output in CSV format |
| jp_xPk1uVp.coilseq.lupas_14 | 2015-04-17 17:45 | 4.0K | COILS output, window length 14 |
| jp_xPk1uVp.coilseq.lupas_21 | 2015-04-17 17:45 | 4.0K | COILS output, window length 21 |
| jp_xPk1uVp.coilseq.lupas_28 | 2015-04-17 17:45 | 4.0K | COILS output, window length 28 |
| jp_xPk1uVp.concise | 2015-04-17 17:45 | 19K | Prediction: coiled-coil, solvent, alignment |
| jp_xPk1uVp.concise.blc | 2015-04-17 17:45 | 9.5K | BLC format prediction and alignment data |
| jp_xPk1uVp.concise.fasta | 2015-04-17 17:45 | 9.2K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_xPk1uVp.concise.pdf | 2015-04-17 17:45 | 56K | PDF prediction and alignment data |
| jp_xPk1uVp.concise.ps | 2015-04-17 17:45 | 1.0M | Prediction: coiled-coil, solvent, alignment |
| jp_xPk1uVp.fasta | 2015-04-17 17:22 | 110 | Input query sequence in FASTA format |
| jp_xPk1uVp.full_MSA.fasta | 2015-04-17 17:45 | 75K | Full MSA before JPred filters in FASTA |
| jp_xPk1uVp.full_MSA.fasta.noGaps.html | 2015-04-17 17:45 | 71K | Full MSA before JPred filters in FASTA |
| jp_xPk1uVp.full_MSA.fasta.withGaps.html | 2015-04-17 17:45 | 347K | Full MSA before JPred filters in FASTA |
| jp_xPk1uVp.hmm | 2015-04-17 17:45 | 18K | HHMer2 profile of the alignment |
| jp_xPk1uVp.html | 2015-04-17 17:45 | 30K | HTML prediction and alignment data |
| jp_xPk1uVp.input | 2015-04-17 16:39 | 103 | Raw input data for analysis |
| jp_xPk1uVp.jalview | 2015-04-17 17:45 | 2.7K | Jalview annotation file for alignment |
| jp_xPk1uVp.jnet | 2015-04-17 17:45 | 3.6K | Jnet secondary structure output |
| jp_xPk1uVp.profile | 2015-04-17 17:42 | 16K | PSIBLAST profile from alignment |
| jp_xPk1uVp.pssm | 2015-04-17 17:45 | 21K | PSIBLAST PSSM for Jnet |
| jp_xPk1uVp.results.html | 2016-02-15 12:17 | 48K | JPred results page |
| jp_xPk1uVp.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_xPk1uVp.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_xPk1uVp.seq | 2015-04-17 16:39 | 110 | Sequence data file |
| jp_xPk1uVp.simple.html | 2015-04-17 17:45 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_xPk1uVp.svg.html) | jp_xPk1uVp.svg.html | 2015-04-17 17:45 | 40K | Jalview SVG summary of results |
| jp_xPk1uVp.tar.gz | 2015-04-17 17:45 | 178K | Archive containing complete results |
