JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:26 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1nrja_.name2015-04-17 17:16 0 Job name flag file
[ ]jp_uoZ99Xh.align2015-04-17 18:26 3.9KPSIBLAST alignment in FASTA format
[TXT]jp_uoZ99Xh.als2015-04-17 18:26 2.6KAlscript command file for PS/PDF output
[ ]jp_uoZ99Xh.blast.gz2015-04-17 18:26 7.7KCompressed PSIBLAST output file
[TXT]jp_uoZ99Xh.coils.csv2015-04-17 18:26 912 COILS output in CSV format
[ ]jp_uoZ99Xh.coilseq.lupas_142015-04-17 18:26 6.2KCOILS output, window length 14
[ ]jp_uoZ99Xh.coilseq.lupas_212015-04-17 18:26 6.2KCOILS output, window length 21
[ ]jp_uoZ99Xh.coilseq.lupas_282015-04-17 18:26 6.2KCOILS output, window length 28
[ ]jp_uoZ99Xh.concise2015-04-17 18:26 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_uoZ99Xh.concise.blc2015-04-17 18:26 6.1KBLC format prediction and alignment data
[ ]jp_uoZ99Xh.concise.fasta2015-04-17 18:26 5.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_uoZ99Xh.concise.pdf2015-04-17 18:26 40KPDF prediction and alignment data
[ ]jp_uoZ99Xh.concise.ps2015-04-17 18:26 713KPrediction: coiled-coil, solvent, alignment
[ ]jp_uoZ99Xh.fasta2015-04-17 18:24 162 Input query sequence in FASTA format
[ ]jp_uoZ99Xh.full_MSA.fasta2015-04-17 18:26 6.6KFull MSA before JPred filters in FASTA
[TXT]jp_uoZ99Xh.full_MSA.fasta.noGaps.html2015-04-17 18:26 8.2KFull MSA before JPred filters in FASTA
[TXT]jp_uoZ99Xh.full_MSA.fasta.withGaps.html2015-04-17 18:26 22KFull MSA before JPred filters in FASTA
[ ]jp_uoZ99Xh.hmm2015-04-17 18:26 28KHHMer2 profile of the alignment
[TXT]jp_uoZ99Xh.html2015-04-17 18:26 22KHTML prediction and alignment data
[ ]jp_uoZ99Xh.input2015-04-17 17:16 154 Raw input data for analysis
[ ]jp_uoZ99Xh.jalview2015-04-17 18:26 3.8KJalview annotation file for alignment
[ ]jp_uoZ99Xh.jnet2015-04-17 18:26 5.4KJnet secondary structure output
[TXT]jp_uoZ99Xh.profile2015-04-17 18:25 24KPSIBLAST profile from alignment
[ ]jp_uoZ99Xh.pssm2015-04-17 18:26 32KPSIBLAST PSSM for Jnet
[TXT]jp_uoZ99Xh.results.html2016-02-15 12:17 68KJPred results page
[TXT]jp_uoZ99Xh.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_uoZ99Xh.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_uoZ99Xh.seq2015-04-17 17:16 162 Sequence data file
[TXT]jp_uoZ99Xh.simple.html2015-04-17 18:26 1.4KBrief HTML: sequence and prediction only
[TXT]jp_uoZ99Xh.svg.html2015-04-17 18:26 60KJalview SVG summary of results
[ ]jp_uoZ99Xh.tar.gz2015-04-17 18:26 97KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.