JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:08 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o75a3.name2015-04-17 16:40 0 Job name flag file
[ ]jp_M0izc85.align2015-04-17 18:08 6.8KPSIBLAST alignment in FASTA format
[TXT]jp_M0izc85.als2015-04-17 18:08 3.6KAlscript command file for PS/PDF output
[ ]jp_M0izc85.blast.gz2015-04-17 18:08 15KCompressed PSIBLAST output file
[TXT]jp_M0izc85.coils.csv2015-04-17 18:08 1.1KCOILS output in CSV format
[ ]jp_M0izc85.coilseq.lupas_142015-04-17 18:08 8.0KCOILS output, window length 14
[ ]jp_M0izc85.coilseq.lupas_212015-04-17 18:08 8.0KCOILS output, window length 21
[ ]jp_M0izc85.coilseq.lupas_282015-04-17 18:08 8.0KCOILS output, window length 28
[ ]jp_M0izc85.concise2015-04-17 18:08 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_M0izc85.concise.blc2015-04-17 18:08 9.6KBLC format prediction and alignment data
[ ]jp_M0izc85.concise.fasta2015-04-17 18:08 8.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_M0izc85.concise.pdf2015-04-17 18:08 56KPDF prediction and alignment data
[ ]jp_M0izc85.concise.ps2015-04-17 18:08 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_M0izc85.fasta2015-04-17 17:23 206 Input query sequence in FASTA format
[ ]jp_M0izc85.full_MSA.fasta2015-04-17 18:08 15KFull MSA before JPred filters in FASTA
[TXT]jp_M0izc85.full_MSA.fasta.noGaps.html2015-04-17 18:08 12KFull MSA before JPred filters in FASTA
[TXT]jp_M0izc85.full_MSA.fasta.withGaps.html2015-04-17 18:08 39KFull MSA before JPred filters in FASTA
[ ]jp_M0izc85.hmm2015-04-17 18:08 36KHHMer2 profile of the alignment
[TXT]jp_M0izc85.html2015-04-17 18:08 28KHTML prediction and alignment data
[ ]jp_M0izc85.input2015-04-17 16:40 198 Raw input data for analysis
[ ]jp_M0izc85.jalview2015-04-17 18:08 4.6KJalview annotation file for alignment
[ ]jp_M0izc85.jnet2015-04-17 18:08 7.0KJnet secondary structure output
[TXT]jp_M0izc85.profile2015-04-17 18:01 31KPSIBLAST profile from alignment
[ ]jp_M0izc85.pssm2015-04-17 18:08 41KPSIBLAST PSSM for Jnet
[TXT]jp_M0izc85.results.html2016-02-15 12:17 87KJPred results page
[TXT]jp_M0izc85.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_M0izc85.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_M0izc85.seq2015-04-17 16:40 206 Sequence data file
[TXT]jp_M0izc85.simple.html2015-04-17 18:08 1.7KBrief HTML: sequence and prediction only
[TXT]jp_M0izc85.svg.html2015-04-17 18:08 79KJalview SVG summary of results
[ ]jp_M0izc85.tar.gz2015-04-17 18:08 131KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.