JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_EMthxvx.tar.gz2015-04-17 15:54 177KArchive containing complete results
[TXT]jp_EMthxvx.svg.html2015-04-17 15:54 80KJalview SVG summary of results
[TXT]jp_EMthxvx.simple.html2015-04-17 15:54 1.7KBrief HTML: sequence and prediction only
[ ]jp_EMthxvx.seq2015-04-17 15:26 214 Sequence data file
[TXT]jp_EMthxvx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_EMthxvx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_EMthxvx.results.html2016-02-15 12:17 88KJPred results page
[ ]jp_EMthxvx.pssm2015-04-17 15:54 43KPSIBLAST PSSM for Jnet
[TXT]jp_EMthxvx.profile2015-04-17 15:44 32KPSIBLAST profile from alignment
[ ]jp_EMthxvx.jnet2015-04-17 15:54 7.3KJnet secondary structure output
[ ]jp_EMthxvx.jalview2015-04-17 15:54 4.7KJalview annotation file for alignment
[ ]jp_EMthxvx.input2015-04-17 15:26 206 Raw input data for analysis
[TXT]jp_EMthxvx.html2015-04-17 15:54 30KHTML prediction and alignment data
[ ]jp_EMthxvx.hmm2015-04-17 15:54 37KHHMer2 profile of the alignment
[TXT]jp_EMthxvx.full_MSA.fasta.withGaps.html2015-04-17 15:54 65KFull MSA before JPred filters in FASTA
[TXT]jp_EMthxvx.full_MSA.fasta.noGaps.html2015-04-17 15:54 15KFull MSA before JPred filters in FASTA
[ ]jp_EMthxvx.full_MSA.fasta2015-04-17 15:54 16KFull MSA before JPred filters in FASTA
[ ]jp_EMthxvx.fasta2015-04-17 15:26 214 Input query sequence in FASTA format
[ ]jp_EMthxvx.concise.ps2015-04-17 15:54 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_EMthxvx.concise.pdf2015-04-17 15:54 109KPDF prediction and alignment data
[ ]jp_EMthxvx.concise.fasta2015-04-17 15:54 9.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_EMthxvx.concise.blc2015-04-17 15:54 10KBLC format prediction and alignment data
[ ]jp_EMthxvx.concise2015-04-17 15:54 23KPrediction: coiled-coil, solvent, alignment
[ ]jp_EMthxvx.coilseq.lupas_282015-04-17 15:54 8.4KCOILS output, window length 28
[ ]jp_EMthxvx.coilseq.lupas_212015-04-17 15:54 8.4KCOILS output, window length 21
[ ]jp_EMthxvx.coilseq.lupas_142015-04-17 15:54 8.4KCOILS output, window length 14
[TXT]jp_EMthxvx.coils.csv2015-04-17 15:54 1.2KCOILS output in CSV format
[ ]jp_EMthxvx.blast.gz2015-04-17 15:54 16KCompressed PSIBLAST output file
[TXT]jp_EMthxvx.als2015-04-17 15:54 3.6KAlscript command file for PS/PDF output
[ ]jp_EMthxvx.align2015-04-17 15:54 7.5KPSIBLAST alignment in FASTA format
[TXT]d1ogmx1.name2015-04-17 15:26 0 Job name flag file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]LOG2015-04-17 15:54 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.