JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1q88a_.name2015-04-17 19:09 0 Job name flag file
[ ]jp_edue7Xt.align2015-04-17 21:32 1.4KPSIBLAST alignment in FASTA format
[TXT]jp_edue7Xt.als2015-04-17 21:32 2.8KAlscript command file for PS/PDF output
[ ]jp_edue7Xt.blast.gz2015-04-17 21:32 3.1KCompressed PSIBLAST output file
[TXT]jp_edue7Xt.coils.csv2015-04-17 21:32 1.1KCOILS output in CSV format
[ ]jp_edue7Xt.coilseq.lupas_142015-04-17 21:32 7.9KCOILS output, window length 14
[ ]jp_edue7Xt.coilseq.lupas_212015-04-17 21:32 7.9KCOILS output, window length 21
[ ]jp_edue7Xt.coilseq.lupas_282015-04-17 21:32 7.9KCOILS output, window length 28
[ ]jp_edue7Xt.concise2015-04-17 21:32 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_edue7Xt.concise.blc2015-04-17 21:32 4.3KBLC format prediction and alignment data
[ ]jp_edue7Xt.concise.fasta2015-04-17 21:32 3.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_edue7Xt.concise.pdf2015-04-17 21:32 29KPDF prediction and alignment data
[ ]jp_edue7Xt.concise.ps2015-04-17 21:32 493KPrediction: coiled-coil, solvent, alignment
[ ]jp_edue7Xt.fasta2015-04-17 21:30 204 Input query sequence in FASTA format
[ ]jp_edue7Xt.full_MSA.fasta2015-04-17 21:32 1.8KFull MSA before JPred filters in FASTA
[TXT]jp_edue7Xt.full_MSA.fasta.noGaps.html2015-04-17 21:32 2.5KFull MSA before JPred filters in FASTA
[TXT]jp_edue7Xt.full_MSA.fasta.withGaps.html2015-04-17 21:32 4.7KFull MSA before JPred filters in FASTA
[ ]jp_edue7Xt.hmm2015-04-17 21:32 35KHHMer2 profile of the alignment
[TXT]jp_edue7Xt.html2015-04-17 21:32 21KHTML prediction and alignment data
[ ]jp_edue7Xt.input2015-04-17 19:09 196 Raw input data for analysis
[ ]jp_edue7Xt.jalview2015-04-17 21:32 4.6KJalview annotation file for alignment
[ ]jp_edue7Xt.jnet2015-04-17 21:32 6.9KJnet secondary structure output
[TXT]jp_edue7Xt.profile2015-04-17 21:31 30KPSIBLAST profile from alignment
[ ]jp_edue7Xt.pssm2015-04-17 21:32 41KPSIBLAST PSSM for Jnet
[TXT]jp_edue7Xt.results.html2016-02-15 12:18 84KJPred results page
[TXT]jp_edue7Xt.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_edue7Xt.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_edue7Xt.seq2015-04-17 19:09 204 Sequence data file
[TXT]jp_edue7Xt.simple.html2015-04-17 21:32 1.5KBrief HTML: sequence and prediction only
[TXT]jp_edue7Xt.svg.html2015-04-17 21:32 76KJalview SVG summary of results
[ ]jp_edue7Xt.tar.gz2015-04-17 21:32 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.