JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rkia1.name2015-04-17 17:20 0 Job name flag file
[ ]jp_JdQJL6w.align2015-04-17 18:30 1.0KPSIBLAST alignment in FASTA format
[TXT]jp_JdQJL6w.als2015-04-17 18:30 2.3KAlscript command file for PS/PDF output
[ ]jp_JdQJL6w.blast.gz2015-04-17 18:30 2.4KCompressed PSIBLAST output file
[TXT]jp_JdQJL6w.coils.csv2015-04-17 18:30 618 COILS output in CSV format
[ ]jp_JdQJL6w.coilseq.lupas_142015-04-17 18:30 4.1KCOILS output, window length 14
[ ]jp_JdQJL6w.coilseq.lupas_212015-04-17 18:30 4.1KCOILS output, window length 21
[ ]jp_JdQJL6w.coilseq.lupas_282015-04-17 18:30 4.1KCOILS output, window length 28
[ ]jp_JdQJL6w.concise2015-04-17 18:30 6.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_JdQJL6w.concise.blc2015-04-17 18:30 2.5KBLC format prediction and alignment data
[ ]jp_JdQJL6w.concise.fasta2015-04-17 18:30 2.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_JdQJL6w.concise.pdf2015-04-17 18:30 18KPDF prediction and alignment data
[ ]jp_JdQJL6w.concise.ps2015-04-17 18:30 288KPrediction: coiled-coil, solvent, alignment
[ ]jp_JdQJL6w.fasta2015-04-17 18:26 112 Input query sequence in FASTA format
[ ]jp_JdQJL6w.full_MSA.fasta2015-04-17 18:30 1.2KFull MSA before JPred filters in FASTA
[TXT]jp_JdQJL6w.full_MSA.fasta.noGaps.html2015-04-17 18:30 2.3KFull MSA before JPred filters in FASTA
[TXT]jp_JdQJL6w.full_MSA.fasta.withGaps.html2015-04-17 18:30 3.5KFull MSA before JPred filters in FASTA
[ ]jp_JdQJL6w.hmm2015-04-17 18:30 18KHHMer2 profile of the alignment
[TXT]jp_JdQJL6w.html2015-04-17 18:30 14KHTML prediction and alignment data
[ ]jp_JdQJL6w.input2015-04-17 17:20 105 Raw input data for analysis
[ ]jp_JdQJL6w.jalview2015-04-17 18:30 2.8KJalview annotation file for alignment
[ ]jp_JdQJL6w.jnet2015-04-17 18:30 3.7KJnet secondary structure output
[TXT]jp_JdQJL6w.profile2015-04-17 18:28 16KPSIBLAST profile from alignment
[ ]jp_JdQJL6w.pssm2015-04-17 18:30 21KPSIBLAST PSSM for Jnet
[TXT]jp_JdQJL6w.results.html2016-02-15 12:18 50KJPred results page
[TXT]jp_JdQJL6w.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_JdQJL6w.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_JdQJL6w.seq2015-04-17 17:20 112 Sequence data file
[TXT]jp_JdQJL6w.simple.html2015-04-17 18:30 1.3KBrief HTML: sequence and prediction only
[TXT]jp_JdQJL6w.svg.html2015-04-17 18:30 42KJalview SVG summary of results
[ ]jp_JdQJL6w.tar.gz2015-04-17 18:30 47KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.