JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tula_.name2015-04-17 15:29 0 Job name flag file
[ ]jp_MHHqYAf.align2015-04-17 15:34 2.7KPSIBLAST alignment in FASTA format
[TXT]jp_MHHqYAf.als2015-04-17 15:34 2.6KAlscript command file for PS/PDF output
[ ]jp_MHHqYAf.blast.gz2015-04-17 15:34 8.7KCompressed PSIBLAST output file
[TXT]jp_MHHqYAf.coils.csv2015-04-17 15:34 642 COILS output in CSV format
[ ]jp_MHHqYAf.coilseq.lupas_142015-04-17 15:34 4.3KCOILS output, window length 14
[ ]jp_MHHqYAf.coilseq.lupas_212015-04-17 15:34 4.3KCOILS output, window length 21
[ ]jp_MHHqYAf.coilseq.lupas_282015-04-17 15:34 4.3KCOILS output, window length 28
[ ]jp_MHHqYAf.concise2015-04-17 15:34 9.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_MHHqYAf.concise.blc2015-04-17 15:34 4.3KBLC format prediction and alignment data
[ ]jp_MHHqYAf.concise.fasta2015-04-17 15:34 3.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_MHHqYAf.concise.pdf2015-04-17 15:34 30KPDF prediction and alignment data
[ ]jp_MHHqYAf.concise.ps2015-04-17 15:34 494KPrediction: coiled-coil, solvent, alignment
[ ]jp_MHHqYAf.fasta2015-04-17 15:32 116 Input query sequence in FASTA format
[ ]jp_MHHqYAf.full_MSA.fasta2015-04-17 15:34 7.0KFull MSA before JPred filters in FASTA
[TXT]jp_MHHqYAf.full_MSA.fasta.noGaps.html2015-04-17 15:34 10KFull MSA before JPred filters in FASTA
[TXT]jp_MHHqYAf.full_MSA.fasta.withGaps.html2015-04-17 15:34 31KFull MSA before JPred filters in FASTA
[ ]jp_MHHqYAf.hmm2015-04-17 15:34 19KHHMer2 profile of the alignment
[TXT]jp_MHHqYAf.html2015-04-17 15:34 18KHTML prediction and alignment data
[ ]jp_MHHqYAf.input2015-04-17 15:29 109 Raw input data for analysis
[ ]jp_MHHqYAf.jalview2015-04-17 15:34 2.9KJalview annotation file for alignment
[ ]jp_MHHqYAf.jnet2015-04-17 15:34 3.8KJnet secondary structure output
[TXT]jp_MHHqYAf.profile2015-04-17 15:33 17KPSIBLAST profile from alignment
[ ]jp_MHHqYAf.pssm2015-04-17 15:34 22KPSIBLAST PSSM for Jnet
[TXT]jp_MHHqYAf.results.html2016-02-15 12:18 52KJPred results page
[TXT]jp_MHHqYAf.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_MHHqYAf.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_MHHqYAf.seq2015-04-17 15:29 116 Sequence data file
[TXT]jp_MHHqYAf.simple.html2015-04-17 15:34 1.3KBrief HTML: sequence and prediction only
[TXT]jp_MHHqYAf.svg.html2015-04-17 15:34 44KJalview SVG summary of results
[ ]jp_MHHqYAf.tar.gz2015-04-17 15:34 79KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.