JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:33 4.8KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ufia_.name2015-04-17 18:34 0 Job name flag file
[ ]jp_F4NMQPY.align2015-04-17 20:33 2.3KPSIBLAST alignment in FASTA format
[TXT]jp_F4NMQPY.als2015-04-17 20:33 1.8KAlscript command file for PS/PDF output
[ ]jp_F4NMQPY.blast.gz2015-04-17 20:33 2.8KCompressed PSIBLAST output file
[TXT]jp_F4NMQPY.coils.csv2015-04-17 20:33 318 COILS output in CSV format
[ ]jp_F4NMQPY.coilseq.lupas_142015-04-17 20:33 2.0KCOILS output, window length 14
[ ]jp_F4NMQPY.coilseq.lupas_212015-04-17 20:33 2.0KCOILS output, window length 21
[ ]jp_F4NMQPY.coilseq.lupas_282015-04-17 20:33 2.0KCOILS output, window length 28
[ ]jp_F4NMQPY.concise2015-04-17 20:33 6.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_F4NMQPY.concise.blc2015-04-17 20:33 3.1KBLC format prediction and alignment data
[ ]jp_F4NMQPY.concise.fasta2015-04-17 20:33 2.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_F4NMQPY.concise.pdf2015-04-17 20:33 29KPDF prediction and alignment data
[ ]jp_F4NMQPY.concise.ps2015-04-17 20:33 577KPrediction: coiled-coil, solvent, alignment
[ ]jp_F4NMQPY.fasta2015-04-17 20:31 61 Input query sequence in FASTA format
[ ]jp_F4NMQPY.full_MSA.fasta2015-04-17 20:33 2.3KFull MSA before JPred filters in FASTA
[TXT]jp_F4NMQPY.full_MSA.fasta.noGaps.html2015-04-17 20:33 6.4KFull MSA before JPred filters in FASTA
[TXT]jp_F4NMQPY.full_MSA.fasta.withGaps.html2015-04-17 20:33 6.4KFull MSA before JPred filters in FASTA
[ ]jp_F4NMQPY.hmm2015-04-17 20:33 9.0KHHMer2 profile of the alignment
[TXT]jp_F4NMQPY.html2015-04-17 20:33 15KHTML prediction and alignment data
[ ]jp_F4NMQPY.input2015-04-17 18:34 55 Raw input data for analysis
[ ]jp_F4NMQPY.jalview2015-04-17 20:33 1.8KJalview annotation file for alignment
[ ]jp_F4NMQPY.jnet2015-04-17 20:33 1.8KJnet secondary structure output
[TXT]jp_F4NMQPY.profile2015-04-17 20:32 8.1KPSIBLAST profile from alignment
[ ]jp_F4NMQPY.pssm2015-04-17 20:33 10KPSIBLAST PSSM for Jnet
[TXT]jp_F4NMQPY.results.html2016-02-15 12:18 31KJPred results page
[TXT]jp_F4NMQPY.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_F4NMQPY.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_F4NMQPY.seq2015-04-17 18:34 61 Sequence data file
[TXT]jp_F4NMQPY.simple.html2015-04-17 20:33 1.0KBrief HTML: sequence and prediction only
[TXT]jp_F4NMQPY.svg.html2015-04-17 20:33 23KJalview SVG summary of results
[ ]jp_F4NMQPY.tar.gz2015-04-17 20:33 41KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.