JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:36 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1utya_.name2015-04-17 18:35 0 Job name flag file
[ ]jp_o6JJukg.align2015-04-17 20:35 4.9KPSIBLAST alignment in FASTA format
[TXT]jp_o6JJukg.als2015-04-17 20:35 3.1KAlscript command file for PS/PDF output
[ ]jp_o6JJukg.blast.gz2015-04-17 20:35 9.8KCompressed PSIBLAST output file
[TXT]jp_o6JJukg.coils.csv2015-04-17 20:35 948 COILS output in CSV format
[ ]jp_o6JJukg.coilseq.lupas_142015-04-17 20:35 6.4KCOILS output, window length 14
[ ]jp_o6JJukg.coilseq.lupas_212015-04-17 20:35 6.4KCOILS output, window length 21
[ ]jp_o6JJukg.coilseq.lupas_282015-04-17 20:35 6.4KCOILS output, window length 28
[ ]jp_o6JJukg.concise2015-04-17 20:35 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_o6JJukg.concise.blc2015-04-17 20:35 7.1KBLC format prediction and alignment data
[ ]jp_o6JJukg.concise.fasta2015-04-17 20:35 6.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_o6JJukg.concise.pdf2015-04-17 20:35 48KPDF prediction and alignment data
[ ]jp_o6JJukg.concise.ps2015-04-17 20:35 850KPrediction: coiled-coil, solvent, alignment
[ ]jp_o6JJukg.fasta2015-04-17 20:32 168 Input query sequence in FASTA format
[ ]jp_o6JJukg.full_MSA.fasta2015-04-17 20:35 8.9KFull MSA before JPred filters in FASTA
[TXT]jp_o6JJukg.full_MSA.fasta.noGaps.html2015-04-17 20:35 13KFull MSA before JPred filters in FASTA
[TXT]jp_o6JJukg.full_MSA.fasta.withGaps.html2015-04-17 20:35 26KFull MSA before JPred filters in FASTA
[ ]jp_o6JJukg.hmm2015-04-17 20:35 29KHHMer2 profile of the alignment
[TXT]jp_o6JJukg.html2015-04-17 20:35 26KHTML prediction and alignment data
[ ]jp_o6JJukg.input2015-04-17 18:35 160 Raw input data for analysis
[ ]jp_o6JJukg.jalview2015-04-17 20:35 3.9KJalview annotation file for alignment
[ ]jp_o6JJukg.jnet2015-04-17 20:35 5.6KJnet secondary structure output
[TXT]jp_o6JJukg.profile2015-04-17 20:34 25KPSIBLAST profile from alignment
[ ]jp_o6JJukg.pssm2015-04-17 20:35 33KPSIBLAST PSSM for Jnet
[TXT]jp_o6JJukg.results.html2016-02-15 12:18 71KJPred results page
[TXT]jp_o6JJukg.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_o6JJukg.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_o6JJukg.seq2015-04-17 18:35 168 Sequence data file
[TXT]jp_o6JJukg.simple.html2015-04-17 20:35 1.5KBrief HTML: sequence and prediction only
[TXT]jp_o6JJukg.svg.html2015-04-17 20:36 63KJalview SVG summary of results
[ ]jp_o6JJukg.tar.gz2015-04-17 20:36 110KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.