JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:35 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vcca_.name2015-04-17 18:35 0 Job name flag file
[ ]jp_GF5RrOq.align2015-04-17 20:35 1.8KPSIBLAST alignment in FASTA format
[TXT]jp_GF5RrOq.als2015-04-17 20:35 2.2KAlscript command file for PS/PDF output
[ ]jp_GF5RrOq.blast.gz2015-04-17 20:35 3.7KCompressed PSIBLAST output file
[TXT]jp_GF5RrOq.coils.csv2015-04-17 20:35 492 COILS output in CSV format
[ ]jp_GF5RrOq.coilseq.lupas_142015-04-17 20:35 3.2KCOILS output, window length 14
[ ]jp_GF5RrOq.coilseq.lupas_212015-04-17 20:35 3.2KCOILS output, window length 21
[ ]jp_GF5RrOq.coilseq.lupas_282015-04-17 20:35 3.2KCOILS output, window length 28
[ ]jp_GF5RrOq.concise2015-04-17 20:35 6.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_GF5RrOq.concise.blc2015-04-17 20:35 3.0KBLC format prediction and alignment data
[ ]jp_GF5RrOq.concise.fasta2015-04-17 20:35 2.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_GF5RrOq.concise.pdf2015-04-17 20:35 19KPDF prediction and alignment data
[ ]jp_GF5RrOq.concise.ps2015-04-17 20:35 322KPrediction: coiled-coil, solvent, alignment
[ ]jp_GF5RrOq.fasta2015-04-17 20:33 91 Input query sequence in FASTA format
[ ]jp_GF5RrOq.full_MSA.fasta2015-04-17 20:35 2.2KFull MSA before JPred filters in FASTA
[TXT]jp_GF5RrOq.full_MSA.fasta.noGaps.html2015-04-17 20:35 5.0KFull MSA before JPred filters in FASTA
[TXT]jp_GF5RrOq.full_MSA.fasta.withGaps.html2015-04-17 20:35 5.0KFull MSA before JPred filters in FASTA
[ ]jp_GF5RrOq.hmm2015-04-17 20:35 14KHHMer2 profile of the alignment
[TXT]jp_GF5RrOq.html2015-04-17 20:35 13KHTML prediction and alignment data
[ ]jp_GF5RrOq.input2015-04-17 18:35 84 Raw input data for analysis
[ ]jp_GF5RrOq.jalview2015-04-17 20:35 2.3KJalview annotation file for alignment
[ ]jp_GF5RrOq.jnet2015-04-17 20:35 2.9KJnet secondary structure output
[TXT]jp_GF5RrOq.profile2015-04-17 20:34 13KPSIBLAST profile from alignment
[ ]jp_GF5RrOq.pssm2015-04-17 20:35 17KPSIBLAST PSSM for Jnet
[TXT]jp_GF5RrOq.results.html2016-02-15 12:18 42KJPred results page
[TXT]jp_GF5RrOq.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GF5RrOq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GF5RrOq.seq2015-04-17 18:35 91 Sequence data file
[TXT]jp_GF5RrOq.simple.html2015-04-17 20:35 1.2KBrief HTML: sequence and prediction only
[TXT]jp_GF5RrOq.svg.html2015-04-17 20:35 34KJalview SVG summary of results
[ ]jp_GF5RrOq.tar.gz2015-04-17 20:35 48KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.