JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_M9iMbkv.als2015-04-17 16:53 3.1KAlscript command file for PS/PDF output
[ ]jp_M9iMbkv.tar.gz2015-04-17 16:55 17MArchive containing complete results
[ ]jp_M9iMbkv.concise.blc2015-04-17 16:53 191KBLC format prediction and alignment data
[TXT]jp_M9iMbkv.simple.html2015-04-17 16:53 1.6KBrief HTML: sequence and prediction only
[TXT]jp_M9iMbkv.coils.csv2015-04-17 16:53 1.2KCOILS output in CSV format
[ ]jp_M9iMbkv.coilseq.lupas_142015-04-17 16:53 8.5KCOILS output, window length 14
[ ]jp_M9iMbkv.coilseq.lupas_212015-04-17 16:53 8.5KCOILS output, window length 21
[ ]jp_M9iMbkv.coilseq.lupas_282015-04-17 16:53 8.5KCOILS output, window length 28
[ ]jp_M9iMbkv.blast.gz2015-04-17 16:51 10MCompressed PSIBLAST output file
[ ]jp_M9iMbkv.full_MSA.fasta2015-04-17 16:53 18MFull MSA before JPred filters in FASTA
[TXT]jp_M9iMbkv.full_MSA.fasta.noGaps.html2015-04-17 16:54 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_M9iMbkv.full_MSA.fasta.withGaps.html2015-04-17 16:54 55MFull MSA before JPred filters in FASTA
[ ]jp_M9iMbkv.hmm2015-04-17 16:53 38KHHMer2 profile of the alignment
[TXT]jp_M9iMbkv.html2015-04-17 16:53 376KHTML prediction and alignment data
[TXT]jp_M9iMbkv.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_M9iMbkv.fasta2015-04-17 16:39 218 Input query sequence in FASTA format
[TXT]jp_M9iMbkv.results.html2016-02-15 12:19 89KJPred results page
[TXT]LOG2015-04-17 16:55 4.7KJPred server log file
[TXT]jp_M9iMbkv.svg.html2015-04-17 16:55 81KJalview SVG summary of results
[ ]jp_M9iMbkv.jalview2015-04-17 16:53 4.9KJalview annotation file for alignment
[TXT]jp_M9iMbkv.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_M9iMbkv.jnet2015-04-17 16:53 7.4KJnet secondary structure output
[TXT]d1z0wa_.name2015-04-17 16:13 0 Job name flag file
[ ]jp_M9iMbkv.concise.pdf2015-04-17 16:54 1.3MPDF prediction and alignment data
[ ]jp_M9iMbkv.pssm2015-04-17 16:53 44KPSIBLAST PSSM for Jnet
[ ]jp_M9iMbkv.align2015-04-17 16:53 190KPSIBLAST alignment in FASTA format
[TXT]jp_M9iMbkv.profile2015-04-17 16:49 33KPSIBLAST profile from alignment
[ ]jp_M9iMbkv.concise2015-04-17 16:53 376KPrediction: coiled-coil, solvent, alignment
[ ]jp_M9iMbkv.concise.fasta2015-04-17 16:53 193KPrediction: coiled-coil, solvent, alignment
[ ]jp_M9iMbkv.concise.ps2015-04-17 16:53 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_M9iMbkv.input2015-04-17 16:13 210 Raw input data for analysis
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_M9iMbkv.seq2015-04-17 16:13 218 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.