JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2axwa1.name2015-04-17 18:39 0 Job name flag file
[ ]jp_GMFtIQ9.align2015-04-17 20:43 4.7KPSIBLAST alignment in FASTA format
[TXT]jp_GMFtIQ9.als2015-04-17 20:43 2.6KAlscript command file for PS/PDF output
[ ]jp_GMFtIQ9.blast.gz2015-04-17 20:43 8.8KCompressed PSIBLAST output file
[TXT]jp_GMFtIQ9.coils.csv2015-04-17 20:43 756 COILS output in CSV format
[ ]jp_GMFtIQ9.coilseq.lupas_142015-04-17 20:43 5.1KCOILS output, window length 14
[ ]jp_GMFtIQ9.coilseq.lupas_212015-04-17 20:43 5.1KCOILS output, window length 21
[ ]jp_GMFtIQ9.coilseq.lupas_282015-04-17 20:43 5.1KCOILS output, window length 28
[ ]jp_GMFtIQ9.concise2015-04-17 20:43 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_GMFtIQ9.concise.blc2015-04-17 20:43 6.5KBLC format prediction and alignment data
[ ]jp_GMFtIQ9.concise.fasta2015-04-17 20:43 6.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_GMFtIQ9.concise.pdf2015-04-17 20:43 43KPDF prediction and alignment data
[ ]jp_GMFtIQ9.concise.ps2015-04-17 20:43 738KPrediction: coiled-coil, solvent, alignment
[ ]jp_GMFtIQ9.fasta2015-04-17 20:38 135 Input query sequence in FASTA format
[ ]jp_GMFtIQ9.full_MSA.fasta2015-04-17 20:43 6.4KFull MSA before JPred filters in FASTA
[TXT]jp_GMFtIQ9.full_MSA.fasta.noGaps.html2015-04-17 20:43 9.8KFull MSA before JPred filters in FASTA
[TXT]jp_GMFtIQ9.full_MSA.fasta.withGaps.html2015-04-17 20:43 26KFull MSA before JPred filters in FASTA
[ ]jp_GMFtIQ9.hmm2015-04-17 20:43 23KHHMer2 profile of the alignment
[TXT]jp_GMFtIQ9.html2015-04-17 20:43 23KHTML prediction and alignment data
[ ]jp_GMFtIQ9.input2015-04-17 18:39 128 Raw input data for analysis
[ ]jp_GMFtIQ9.jalview2015-04-17 20:43 3.2KJalview annotation file for alignment
[ ]jp_GMFtIQ9.jnet2015-04-17 20:43 4.5KJnet secondary structure output
[TXT]jp_GMFtIQ9.profile2015-04-17 20:41 20KPSIBLAST profile from alignment
[ ]jp_GMFtIQ9.pssm2015-04-17 20:43 26KPSIBLAST PSSM for Jnet
[TXT]jp_GMFtIQ9.results.html2016-02-15 12:19 57KJPred results page
[TXT]jp_GMFtIQ9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GMFtIQ9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GMFtIQ9.seq2015-04-17 18:39 135 Sequence data file
[TXT]jp_GMFtIQ9.simple.html2015-04-17 20:43 1.4KBrief HTML: sequence and prediction only
[TXT]jp_GMFtIQ9.svg.html2015-04-17 20:43 49KJalview SVG summary of results
[ ]jp_GMFtIQ9.tar.gz2015-04-17 20:43 96KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.