JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_D9BUkqh.input2015-04-17 16:49 96 Raw input data for analysis
[ ]jp_D9BUkqh.seq2015-04-17 16:49 103 Sequence data file
[TXT]d2bkya_.name2015-04-17 16:49 0 Job name flag file
[ ]jp_D9BUkqh.fasta2015-04-17 17:39 103 Input query sequence in FASTA format
[TXT]jp_D9BUkqh.profile2015-04-17 17:43 15KPSIBLAST profile from alignment
[ ]jp_D9BUkqh.blast.gz2015-04-17 17:43 112KCompressed PSIBLAST output file
[ ]jp_D9BUkqh.full_MSA.fasta2015-04-17 17:43 245KFull MSA before JPred filters in FASTA
[ ]jp_D9BUkqh.align2015-04-17 17:43 28KPSIBLAST alignment in FASTA format
[ ]jp_D9BUkqh.pssm2015-04-17 17:43 19KPSIBLAST PSSM for Jnet
[ ]jp_D9BUkqh.hmm2015-04-17 17:43 17KHHMer2 profile of the alignment
[ ]jp_D9BUkqh.jnet2015-04-17 17:43 3.3KJnet secondary structure output
[ ]jp_D9BUkqh.coilseq.lupas_212015-04-17 17:43 3.7KCOILS output, window length 21
[ ]jp_D9BUkqh.coilseq.lupas_142015-04-17 17:43 3.7KCOILS output, window length 14
[ ]jp_D9BUkqh.coilseq.lupas_282015-04-17 17:43 3.7KCOILS output, window length 28
[TXT]jp_D9BUkqh.coils.csv2015-04-17 17:43 564 COILS output in CSV format
[ ]jp_D9BUkqh.concise2015-04-17 17:43 57KPrediction: coiled-coil, solvent, alignment
[TXT]jp_D9BUkqh.html2015-04-17 17:43 90KHTML prediction and alignment data
[TXT]jp_D9BUkqh.simple.html2015-04-17 17:43 1.2KBrief HTML: sequence and prediction only
[ ]jp_D9BUkqh.jalview2015-04-17 17:43 2.6KJalview annotation file for alignment
[ ]jp_D9BUkqh.concise.fasta2015-04-17 17:43 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_D9BUkqh.concise.blc2015-04-17 17:43 29KBLC format prediction and alignment data
[TXT]jp_D9BUkqh.als2015-04-17 17:43 2.1KAlscript command file for PS/PDF output
[ ]jp_D9BUkqh.concise.ps2015-04-17 17:43 3.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_D9BUkqh.concise.pdf2015-04-17 17:43 188KPDF prediction and alignment data
[TXT]jp_D9BUkqh.full_MSA.fasta.withGaps.html2015-04-17 17:43 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_D9BUkqh.full_MSA.fasta.noGaps.html2015-04-17 17:43 123KFull MSA before JPred filters in FASTA
[TXT]jp_D9BUkqh.svg.html2015-04-17 17:43 38KJalview SVG summary of results
[TXT]LOG2015-04-17 17:44 4.7KJPred server log file
[ ]jp_D9BUkqh.tar.gz2015-04-17 17:44 445KArchive containing complete results
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]jp_D9BUkqh.results.html2016-02-15 12:19 46KJPred results page
[TXT]jp_D9BUkqh.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_D9BUkqh.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.