A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:52 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2dbsa1.name | 2015-04-17 19:19 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Sz1b7G8.align | 2015-04-17 21:51 | 598 | PSIBLAST alignment in FASTA format |
| jp_Sz1b7G8.als | 2015-04-17 21:51 | 2.3K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Sz1b7G8.blast.gz | 2015-04-17 21:51 | 2.3K | Compressed PSIBLAST output file |
| jp_Sz1b7G8.coils.csv | 2015-04-17 21:51 | 510 | COILS output in CSV format |
| jp_Sz1b7G8.coilseq.lupas_14 | 2015-04-17 21:51 | 3.4K | COILS output, window length 14 |
| jp_Sz1b7G8.coilseq.lupas_21 | 2015-04-17 21:51 | 3.4K | COILS output, window length 21 |
| jp_Sz1b7G8.coilseq.lupas_28 | 2015-04-17 21:51 | 3.4K | COILS output, window length 28 |
| jp_Sz1b7G8.concise | 2015-04-17 21:51 | 4.6K | Prediction: coiled-coil, solvent, alignment |
| jp_Sz1b7G8.concise.blc | 2015-04-17 21:51 | 1.8K | BLC format prediction and alignment data |
| jp_Sz1b7G8.concise.fasta | 2015-04-17 21:51 | 1.5K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Sz1b7G8.concise.pdf | 2015-04-17 21:51 | 14K | PDF prediction and alignment data |
| jp_Sz1b7G8.concise.ps | 2015-04-17 21:51 | 211K | Prediction: coiled-coil, solvent, alignment |
| jp_Sz1b7G8.fasta | 2015-04-17 21:46 | 94 | Input query sequence in FASTA format |
| jp_Sz1b7G8.full_MSA.fasta | 2015-04-17 21:51 | 892 | Full MSA before JPred filters in FASTA |
| jp_Sz1b7G8.full_MSA.fasta.noGaps.html | 2015-04-17 21:51 | 1.7K | Full MSA before JPred filters in FASTA |
| jp_Sz1b7G8.full_MSA.fasta.withGaps.html | 2015-04-17 21:51 | 2.2K | Full MSA before JPred filters in FASTA |
| jp_Sz1b7G8.hmm | 2015-04-17 21:51 | 15K | HHMer2 profile of the alignment |
| jp_Sz1b7G8.html | 2015-04-17 21:51 | 11K | HTML prediction and alignment data |
| jp_Sz1b7G8.input | 2015-04-17 19:19 | 87 | Raw input data for analysis |
| jp_Sz1b7G8.jalview | 2015-04-17 21:51 | 2.4K | Jalview annotation file for alignment |
| jp_Sz1b7G8.jnet | 2015-04-17 21:51 | 3.0K | Jnet secondary structure output |
| jp_Sz1b7G8.profile | 2015-04-17 21:49 | 13K | PSIBLAST profile from alignment |
| jp_Sz1b7G8.pssm | 2015-04-17 21:51 | 17K | PSIBLAST PSSM for Jnet |
| jp_Sz1b7G8.results.html | 2016-02-15 12:19 | 44K | JPred results page |
| jp_Sz1b7G8.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_Sz1b7G8.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_Sz1b7G8.seq | 2015-04-17 19:19 | 94 | Sequence data file |
| jp_Sz1b7G8.simple.html | 2015-04-17 21:51 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Sz1b7G8.svg.html) | jp_Sz1b7G8.svg.html | 2015-04-17 21:51 | 36K | Jalview SVG summary of results |
| jp_Sz1b7G8.tar.gz | 2015-04-17 21:52 | 39K | Archive containing complete results |
