A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:16 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2fhza1.name | 2015-04-17 16:18 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_SHzmk09.align | 2015-04-17 17:15 | 1.8K | PSIBLAST alignment in FASTA format |
| jp_SHzmk09.als | 2015-04-17 17:15 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_SHzmk09.blast.gz | 2015-04-17 17:15 | 4.5K | Compressed PSIBLAST output file |
| jp_SHzmk09.coils.csv | 2015-04-17 17:15 | 528 | COILS output in CSV format |
| jp_SHzmk09.coilseq.lupas_14 | 2015-04-17 17:15 | 3.5K | COILS output, window length 14 |
| jp_SHzmk09.coilseq.lupas_21 | 2015-04-17 17:15 | 3.5K | COILS output, window length 21 |
| jp_SHzmk09.coilseq.lupas_28 | 2015-04-17 17:15 | 3.5K | COILS output, window length 28 |
| jp_SHzmk09.concise | 2015-04-17 17:15 | 7.0K | Prediction: coiled-coil, solvent, alignment |
| jp_SHzmk09.concise.blc | 2015-04-17 17:15 | 3.1K | BLC format prediction and alignment data |
| jp_SHzmk09.concise.fasta | 2015-04-17 17:15 | 2.8K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_SHzmk09.concise.pdf | 2015-04-17 17:15 | 21K | PDF prediction and alignment data |
| jp_SHzmk09.concise.ps | 2015-04-17 17:15 | 342K | Prediction: coiled-coil, solvent, alignment |
| jp_SHzmk09.fasta | 2015-04-17 16:45 | 97 | Input query sequence in FASTA format |
| jp_SHzmk09.full_MSA.fasta | 2015-04-17 17:15 | 3.1K | Full MSA before JPred filters in FASTA |
| jp_SHzmk09.full_MSA.fasta.noGaps.html | 2015-04-17 17:15 | 5.6K | Full MSA before JPred filters in FASTA |
| jp_SHzmk09.full_MSA.fasta.withGaps.html | 2015-04-17 17:15 | 10K | Full MSA before JPred filters in FASTA |
| jp_SHzmk09.hmm | 2015-04-17 17:15 | 16K | HHMer2 profile of the alignment |
| jp_SHzmk09.html | 2015-04-17 17:15 | 14K | HTML prediction and alignment data |
| jp_SHzmk09.input | 2015-04-17 16:18 | 90 | Raw input data for analysis |
| jp_SHzmk09.jalview | 2015-04-17 17:15 | 2.5K | Jalview annotation file for alignment |
| jp_SHzmk09.jnet | 2015-04-17 17:15 | 3.1K | Jnet secondary structure output |
| jp_SHzmk09.profile | 2015-04-17 16:58 | 14K | PSIBLAST profile from alignment |
| jp_SHzmk09.pssm | 2015-04-17 17:15 | 18K | PSIBLAST PSSM for Jnet |
| jp_SHzmk09.results.html | 2016-02-15 12:19 | 43K | JPred results page |
| jp_SHzmk09.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_SHzmk09.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_SHzmk09.seq | 2015-04-17 16:18 | 97 | Sequence data file |
| jp_SHzmk09.simple.html | 2015-04-17 17:15 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_SHzmk09.svg.html) | jp_SHzmk09.svg.html | 2015-04-17 17:16 | 35K | Jalview SVG summary of results |
| jp_SHzmk09.tar.gz | 2015-04-17 17:16 | 54K | Archive containing complete results |
