JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_eyG9LJS.tar.gz2015-04-17 16:47 34KArchive containing complete results
[TXT]jp_eyG9LJS.svg.html2015-04-17 16:47 28KJalview SVG summary of results
[TXT]jp_eyG9LJS.simple.html2015-04-17 16:47 1.1KBrief HTML: sequence and prediction only
[ ]jp_eyG9LJS.seq2015-04-17 16:18 78 Sequence data file
[TXT]jp_eyG9LJS.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_eyG9LJS.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eyG9LJS.results.html2016-02-15 12:19 37KJPred results page
[ ]jp_eyG9LJS.pssm2015-04-17 16:47 14KPSIBLAST PSSM for Jnet
[TXT]jp_eyG9LJS.profile2015-04-17 16:46 11KPSIBLAST profile from alignment
[ ]jp_eyG9LJS.jnet2015-04-17 16:47 2.5KJnet secondary structure output
[ ]jp_eyG9LJS.jalview2015-04-17 16:47 2.1KJalview annotation file for alignment
[ ]jp_eyG9LJS.input2015-04-17 16:18 72 Raw input data for analysis
[TXT]jp_eyG9LJS.html2015-04-17 16:47 9.0KHTML prediction and alignment data
[ ]jp_eyG9LJS.hmm2015-04-17 16:47 12KHHMer2 profile of the alignment
[TXT]jp_eyG9LJS.full_MSA.fasta.withGaps.html2015-04-17 16:47 4.2KFull MSA before JPred filters in FASTA
[TXT]jp_eyG9LJS.full_MSA.fasta.noGaps.html2015-04-17 16:47 4.2KFull MSA before JPred filters in FASTA
[ ]jp_eyG9LJS.full_MSA.fasta2015-04-17 16:47 1.7KFull MSA before JPred filters in FASTA
[ ]jp_eyG9LJS.fasta2015-04-17 16:45 78 Input query sequence in FASTA format
[ ]jp_eyG9LJS.concise.ps2015-04-17 16:47 168KPrediction: coiled-coil, solvent, alignment
[ ]jp_eyG9LJS.concise.pdf2015-04-17 16:47 11KPDF prediction and alignment data
[ ]jp_eyG9LJS.concise.fasta2015-04-17 16:47 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_eyG9LJS.concise.blc2015-04-17 16:47 1.6KBLC format prediction and alignment data
[ ]jp_eyG9LJS.concise2015-04-17 16:47 3.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_eyG9LJS.coilseq.lupas_282015-04-17 16:47 2.7KCOILS output, window length 28
[ ]jp_eyG9LJS.coilseq.lupas_212015-04-17 16:47 2.7KCOILS output, window length 21
[ ]jp_eyG9LJS.coilseq.lupas_142015-04-17 16:47 2.7KCOILS output, window length 14
[TXT]jp_eyG9LJS.coils.csv2015-04-17 16:47 420 COILS output in CSV format
[ ]jp_eyG9LJS.blast.gz2015-04-17 16:47 2.7KCompressed PSIBLAST output file
[TXT]jp_eyG9LJS.als2015-04-17 16:47 1.9KAlscript command file for PS/PDF output
[ ]jp_eyG9LJS.align2015-04-17 16:47 571 PSIBLAST alignment in FASTA format
[TXT]d2fqma1.name2015-04-17 16:18 0 Job name flag file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]LOG2015-04-17 16:47 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.