JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:00 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2j97a_.name2015-04-17 15:41 0 Job name flag file
[ ]jp_2sQbBFr.align2015-04-17 15:59 2.0KPSIBLAST alignment in FASTA format
[TXT]jp_2sQbBFr.als2015-04-17 15:59 2.6KAlscript command file for PS/PDF output
[ ]jp_2sQbBFr.blast.gz2015-04-17 15:59 12KCompressed PSIBLAST output file
[TXT]jp_2sQbBFr.coils.csv2015-04-17 15:59 618 COILS output in CSV format
[ ]jp_2sQbBFr.coilseq.lupas_142015-04-17 15:59 4.1KCOILS output, window length 14
[ ]jp_2sQbBFr.coilseq.lupas_212015-04-17 15:59 4.1KCOILS output, window length 21
[ ]jp_2sQbBFr.coilseq.lupas_282015-04-17 15:59 4.1KCOILS output, window length 28
[ ]jp_2sQbBFr.concise2015-04-17 15:59 8.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_2sQbBFr.concise.blc2015-04-17 15:59 3.5KBLC format prediction and alignment data
[ ]jp_2sQbBFr.concise.fasta2015-04-17 15:59 3.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_2sQbBFr.concise.pdf2015-04-17 15:59 24KPDF prediction and alignment data
[ ]jp_2sQbBFr.concise.ps2015-04-17 15:59 403KPrediction: coiled-coil, solvent, alignment
[ ]jp_2sQbBFr.fasta2015-04-17 15:52 112 Input query sequence in FASTA format
[ ]jp_2sQbBFr.full_MSA.fasta2015-04-17 15:59 16KFull MSA before JPred filters in FASTA
[TXT]jp_2sQbBFr.full_MSA.fasta.noGaps.html2015-04-17 15:59 25KFull MSA before JPred filters in FASTA
[TXT]jp_2sQbBFr.full_MSA.fasta.withGaps.html2015-04-17 15:59 70KFull MSA before JPred filters in FASTA
[ ]jp_2sQbBFr.hmm2015-04-17 15:59 18KHHMer2 profile of the alignment
[TXT]jp_2sQbBFr.html2015-04-17 15:59 16KHTML prediction and alignment data
[ ]jp_2sQbBFr.input2015-04-17 15:41 105 Raw input data for analysis
[ ]jp_2sQbBFr.jalview2015-04-17 15:59 2.8KJalview annotation file for alignment
[ ]jp_2sQbBFr.jnet2015-04-17 15:59 3.7KJnet secondary structure output
[TXT]jp_2sQbBFr.profile2015-04-17 15:58 16KPSIBLAST profile from alignment
[ ]jp_2sQbBFr.pssm2015-04-17 15:59 21KPSIBLAST PSSM for Jnet
[TXT]jp_2sQbBFr.results.html2016-02-15 12:20 50KJPred results page
[TXT]jp_2sQbBFr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2sQbBFr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_2sQbBFr.seq2015-04-17 15:41 112 Sequence data file
[TXT]jp_2sQbBFr.simple.html2015-04-17 15:59 1.3KBrief HTML: sequence and prediction only
[TXT]jp_2sQbBFr.svg.html2015-04-17 16:00 42KJalview SVG summary of results
[ ]jp_2sQbBFr.tar.gz2015-04-17 16:00 75KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.