JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:59 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2o2ka_.name2015-04-17 15:42 0 Job name flag file
[ ]jp_CenZ86q.align2015-04-17 15:59 206KPSIBLAST alignment in FASTA format
[TXT]jp_CenZ86q.als2015-04-17 15:59 4.2KAlscript command file for PS/PDF output
[ ]jp_CenZ86q.blast.gz2015-04-17 15:58 2.9MCompressed PSIBLAST output file
[TXT]jp_CenZ86q.coils.csv2015-04-17 15:59 2.0KCOILS output in CSV format
[ ]jp_CenZ86q.coilseq.lupas_142015-04-17 15:59 14KCOILS output, window length 14
[ ]jp_CenZ86q.coilseq.lupas_212015-04-17 15:59 14KCOILS output, window length 21
[ ]jp_CenZ86q.coilseq.lupas_282015-04-17 15:59 14KCOILS output, window length 28
[ ]jp_CenZ86q.concise2015-04-17 15:59 415KPrediction: coiled-coil, solvent, alignment
[ ]jp_CenZ86q.concise.blc2015-04-17 15:59 208KBLC format prediction and alignment data
[ ]jp_CenZ86q.concise.fasta2015-04-17 15:59 209KPrediction: coiled-coil, solvent, alignment
[ ]jp_CenZ86q.concise.pdf2015-04-17 15:59 1.4MPDF prediction and alignment data
[ ]jp_CenZ86q.concise.ps2015-04-17 15:59 26MPrediction: coiled-coil, solvent, alignment
[ ]jp_CenZ86q.fasta2015-04-17 15:54 349 Input query sequence in FASTA format
[ ]jp_CenZ86q.full_MSA.fasta2015-04-17 15:58 4.7MFull MSA before JPred filters in FASTA
[TXT]jp_CenZ86q.full_MSA.fasta.noGaps.html2015-04-17 15:59 959KFull MSA before JPred filters in FASTA
[TXT]jp_CenZ86q.full_MSA.fasta.withGaps.html2015-04-17 15:59 15MFull MSA before JPred filters in FASTA
[ ]jp_CenZ86q.hmm2015-04-17 15:59 62KHHMer2 profile of the alignment
[TXT]jp_CenZ86q.html2015-04-17 15:59 348KHTML prediction and alignment data
[ ]jp_CenZ86q.input2015-04-17 15:42 339 Raw input data for analysis
[ ]jp_CenZ86q.jalview2015-04-17 15:59 7.5KJalview annotation file for alignment
[ ]jp_CenZ86q.jnet2015-04-17 15:59 12KJnet secondary structure output
[TXT]jp_CenZ86q.profile2015-04-17 15:57 53KPSIBLAST profile from alignment
[ ]jp_CenZ86q.pssm2015-04-17 15:59 71KPSIBLAST PSSM for Jnet
[TXT]jp_CenZ86q.results.html2016-02-15 12:20 140KJPred results page
[TXT]jp_CenZ86q.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_CenZ86q.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_CenZ86q.seq2015-04-17 15:42 349 Sequence data file
[TXT]jp_CenZ86q.simple.html2015-04-17 15:59 2.0KBrief HTML: sequence and prediction only
[TXT]jp_CenZ86q.svg.html2015-04-17 15:59 132KJalview SVG summary of results
[ ]jp_CenZ86q.tar.gz2015-04-17 15:59 6.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.